Changes in DNA methylation induced by multi-walled carbon nanotube exposure in the workplace

Nanotoxicology. 2017 Nov-Dec;11(9-10):1195-1210. doi: 10.1080/17435390.2017.1406169. Epub 2017 Nov 30.

Abstract

This study was designed to assess the epigenetic alterations in blood cells, induced by occupational exposure to multi-wall carbon nanotubes (MWCNT). The study population comprised of MWCNT-exposed workers (n=24) and unexposed controls (n=43) from the same workplace. We measured global DNA methylation/hydroxymethylation levels on the 5th cytosine residues using a validated liquid chromatography tandem-mass spectrometry (LC-MS/MS) method. Sequence-specific methylation of LINE1 retrotransposable element 1 (L1RE1) elements, and promoter regions of functionally important genes associated with epigenetic regulation [DNA methyltransferase-1 (DNMT1) and histone deacetylase 4 (HDAC4)], DNA damage/repair and cell cycle pathways [nuclear protein, coactivator of histone transcription/ATM serine/threonine kinase (NPAT/ATM)], and a potential transforming growth factor beta (TGF-β) repressor [SKI proto-oncogene (SKI)] were studied using bisulfite pyrosequencing. Analysis of global DNA methylation levels and hydroxymethylation did not reveal significant difference between the MWCNT-exposed and control groups. No significant changes in Cytosine-phosphate-Guanine (CpG) site methylation were observed for the LINE1 (L1RE1) elements. Further analysis of gene-specific DNA methylation showed a significant change in methylation for DNMT1, ATM, SKI, and HDAC4 promoter CpGs in MWCNT-exposed workers. Since DNA methylation plays an important role in silencing/regulation of the genes, and many of these genes have been associated with occupational and smoking-induced diseases and cancer (risk), aberrant methylation of these genes might have a potential effect in MWCNT-exposed workers.

Keywords: DNA methylation; Epigenetics; carbon nanotubes; occupational exposure.

MeSH terms

  • Adult
  • Air Pollutants, Occupational / toxicity*
  • Cross-Sectional Studies
  • DNA (Cytosine-5-)-Methyltransferase 1 / genetics
  • DNA / genetics
  • DNA Methylation / drug effects*
  • DNA Methylation / genetics
  • Epigenesis, Genetic / drug effects*
  • Epigenesis, Genetic / genetics
  • Female
  • Humans
  • Long Interspersed Nucleotide Elements / genetics
  • Male
  • Nanotubes, Carbon / toxicity*
  • Occupational Exposure / adverse effects*
  • Occupational Exposure / analysis
  • Proto-Oncogene Mas
  • Transforming Growth Factor beta / genetics
  • Workplace / standards

Substances

  • Air Pollutants, Occupational
  • MAS1 protein, human
  • Nanotubes, Carbon
  • Proto-Oncogene Mas
  • Transforming Growth Factor beta
  • DNA
  • DNA (Cytosine-5-)-Methyltransferase 1
  • DNMT1 protein, human