Practical Nonuniform Sampling and Non-Fourier Spectral Reconstruction for Multidimensional NMR

Methods Mol Biol. 2018:1688:341-352. doi: 10.1007/978-1-4939-7386-6_15.

Abstract

A general approach to accelerating multidimensional NMR experiments via nonuniform sampling and maximum entropy spectral reconstruction was first demonstrated by Laue and colleagues in 1987. Following decades of continual improvements involving dozens of software packages for non-Fourier spectral analysis and many different schemes for nonuniform sampling, we still lack a clear consensus on best practices for sampling or spectral reconstruction, and programs for processing nonuniformly sampled data are not particularly user-friendly. Nevertheless, it is possible to discern conservative and general guidelines for nonuniform sampling and spectral reconstruction. Here, we describe a robust semi-automated workflow that employs these guidelines for simplifying the selection of a sampling schedule and the processing of the resulting nonuniformly sampled multidimensional NMR data. Our approach is based on NMRbox, a shared platform for NMR software that facilitates workflow development and execution, and enables rapid comparison of alternate approaches.

Keywords: Maximum entropy reconstruction (MaxEnt); Multidimensional; NMR; Nonuniform sampling; Nus-tool; Spectral reconstruction.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Magnetic Resonance Spectroscopy / methods*
  • Software*
  • Specimen Handling / methods*
  • Workflow