Prodomain-growth factor swapping in the structure of pro-TGF-β1

J Biol Chem. 2018 Feb 2;293(5):1579-1589. doi: 10.1074/jbc.M117.809657. Epub 2017 Nov 5.

Abstract

TGF-β is synthesized as a proprotein that dimerizes in the endoplasmic reticulum. After processing in the Golgi to cleave the N-terminal prodomain from the C-terminal growth factor (GF) domain in each monomer, pro-TGF-β is secreted and stored in latent complexes. It is unclear which prodomain and GF monomer are linked before proprotein convertase cleavage and how much conformational change occurs following cleavage. We have determined a structure of pro-TGF-β1 with the proprotein convertase cleavage site mutated to mimic the structure of the TGF-β1 proprotein. Structure, mutation, and model building demonstrate that the prodomain arm domain in one monomer is linked to the GF that interacts with the arm domain in the other monomer in the dimeric structure (i.e. the prodomain arm domain and GF domain in each monomer are swapped). Swapping has important implications for the mechanism of biosynthesis in the TGF-β family and is relevant to the mechanism for preferential formation of heterodimers over homodimers for some members of the TGF-β family. Our structure, together with two previous ones, also provides insights into which regions of the prodomain-GF complex are highly structurally conserved and which are perturbed by crystal lattice contacts.

Keywords: Arg-Gly-Asp-Leu-any-any-Leu/Ile (RGDLXX(L/I)); Protein Data Bank (PDB); activin; bone morphogenetic protein (BMP); crystal structure; dimerization; glycoprotein-A repetitions predominant protein (GARP); growth factor (GF); heterodimer; latency-associated peptide (LAP); latent TGF-β-binding proteins (LTBPs); prodomain; proprotein convertase; swapping; transforming growth factor beta (TGF-β).

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Golgi Apparatus / genetics
  • Golgi Apparatus / metabolism
  • HEK293 Cells
  • Humans
  • Models, Molecular*
  • Mutation
  • Protein Domains
  • Protein Precursors / chemistry*
  • Protein Precursors / genetics
  • Protein Precursors / metabolism
  • Transforming Growth Factor beta1 / chemistry*
  • Transforming Growth Factor beta1 / genetics
  • Transforming Growth Factor beta1 / metabolism

Substances

  • Protein Precursors
  • TGFB1 protein, human
  • Transforming Growth Factor beta1

Associated data

  • PDB/5VQP
  • PDB/5VQF
  • PDB/3RJR