A dictionary learning approach for human sperm heads classification

Comput Biol Med. 2017 Dec 1:91:181-190. doi: 10.1016/j.compbiomed.2017.10.009. Epub 2017 Oct 10.

Abstract

Background and objective: To diagnose infertility in men, semen analysis is conducted in which sperm morphology is one of the factors that are evaluated. Since manual assessment of sperm morphology is time-consuming and subjective, automatic classification methods are being developed. Automatic classification of sperm heads is a complicated task due to the intra-class differences and inter-class similarities of class objects. In this research, a Dictionary Learning (DL) technique is utilized to construct a dictionary of sperm head shapes. This dictionary is used to classify the sperm heads into four different classes.

Methods: Square patches are extracted from the sperm head images. Columnized patches from each class of sperm are used to learn class-specific dictionaries. The patches from a test image are reconstructed using each class-specific dictionary and the overall reconstruction error for each class is used to select the best matching class. Average accuracy, precision, recall, and F-score are used to evaluate the classification method. The method is evaluated using two publicly available datasets of human sperm head shapes.

Results: The proposed DL based method achieved an average accuracy of 92.2% on the HuSHeM dataset, and an average recall of 62% on the SCIAN-MorphoSpermGS dataset. The results show a significant improvement compared to a previously published shape-feature-based method. We have achieved high-performance results. In addition, our proposed approach offers a more balanced classifier in which all four classes are recognized with high precision and recall.

Conclusions: In this paper, we use a Dictionary Learning approach in classifying human sperm heads. It is shown that the Dictionary Learning method is far more effective in classifying human sperm heads than classifiers using shape-based features. Also, a dataset of human sperm head shapes is introduced to facilitate future research.

Keywords: Dictionary learning; Infertility; Sparse representation; Sperm abnormality; Sperm head classification; Sperm morphology.

MeSH terms

  • Algorithms
  • Humans
  • Image Interpretation, Computer-Assisted / methods*
  • Machine Learning*
  • Male
  • Microscopy / methods*
  • Sperm Head / classification*
  • Sperm Head / physiology*