Phylogenetic Analysis of Klebsiella pneumoniae from Hospitalized Children, Pakistan

Emerg Infect Dis. 2017 Nov;23(11):1872-1875. doi: 10.3201/eid2311.170833.

Abstract

Klebsiella pneumoniae shows increasing emergence of multidrug-resistant lineages, including strains resistant to all available antimicrobial drugs. We conducted whole-genome sequencing of 178 highly drug-resistant isolates from a tertiary hospital in Lahore, Pakistan. Phylogenetic analyses to place these isolates into global context demonstrate the expansion of multiple independent lineages, including K. quasipneumoniae.

Keywords: Australia; ESBL; Klebsiella; Klebsiella pneumonia; Pakistan; United Kingdom; antimicrobial resistance; bacteria; children; extended-spectrum β-lactamase; multidrug resistance; neonatal infection.

MeSH terms

  • Adolescent
  • Anti-Bacterial Agents / pharmacology
  • Child
  • Child, Hospitalized
  • Child, Preschool
  • Drug Resistance, Multiple, Bacterial / genetics*
  • Genome, Bacterial / genetics*
  • Humans
  • Infant
  • Infant, Newborn
  • Klebsiella Infections / epidemiology
  • Klebsiella Infections / microbiology*
  • Klebsiella pneumoniae / genetics*
  • Klebsiella pneumoniae / isolation & purification
  • Pakistan / epidemiology
  • Phylogeny
  • Sequence Analysis, DNA

Substances

  • Anti-Bacterial Agents