Aliphatic Hydrocarbon Enhances Phenanthrene Degradation by Autochthonous Prokaryotic Communities from a Pristine Seawater

Microb Ecol. 2018 Apr;75(3):688-700. doi: 10.1007/s00248-017-1078-8. Epub 2017 Oct 3.

Abstract

The microbial diversity and functioning around oceanic islands is poorly described, despite its importance for ecosystem homeostasis. Here, we aimed to verify the occurrence of microbe-driven phenanthrene co-oxidation in the seawater surrounding the Trindade Island (Brazil). We also used Next-Generation Sequencing to evaluate the effects of aliphatic and polycyclic aromatic hydrocarbons (PAHs) on these microbial community assemblies. Microcosms containing seawater from the island enriched with either labelled (9-14C) or non-labelled phenanthrene together with hexadecane, weathered oil, fluoranthene or pyrene, and combinations of these compounds were incubated. Biodegradation of phenanthrene-9-14C was negatively affected in the presence of weathered oil and PAHs but increased in the presence of hexadecane. PAH contamination caused shifts in the seawater microbial community-from a highly diverse one dominated by Alphaproteobacteria to less diverse communities dominated by Gammaproteobacteria. Furthermore, the combination of PAHs exerted a compounded negative influence on the microbial community, reducing its diversity and thus functional capacity of the ecosystem. These results advance our understanding of bacterial community dynamics in response to contrasting qualities of hydrocarbon contamination. This understanding is fundamental in the application and monitoring of bioremediation strategies if accidents involving oil spillages occur near Trindade Island and similar ecosystems.

Keywords: Hydrocarbon biodegradation; Hydrocarbonoclastic bacteria; Metagenomics; Microbial ecology; Pristine environment; Trindade Island.

MeSH terms

  • Alkanes
  • Alphaproteobacteria / drug effects
  • Alphaproteobacteria / metabolism
  • Bacteria / classification
  • Bacteria / drug effects*
  • Bacteria / genetics
  • Bacteria / metabolism*
  • Biodegradation, Environmental
  • Biodiversity
  • Brazil
  • DNA, Bacterial / genetics
  • Ecosystem
  • Gammaproteobacteria / drug effects
  • Gammaproteobacteria / metabolism
  • High-Throughput Nucleotide Sequencing
  • Hydrocarbons / adverse effects*
  • Islands
  • Metagenomics
  • Microbial Consortia / drug effects*
  • Microbial Consortia / genetics
  • Microbial Consortia / physiology*
  • Petroleum Pollution / adverse effects
  • Phenanthrenes / metabolism*
  • Polycyclic Aromatic Hydrocarbons / pharmacology
  • Pyrenes
  • RNA, Ribosomal, 16S / metabolism
  • Seawater / microbiology*
  • Water Pollutants

Substances

  • Alkanes
  • DNA, Bacterial
  • Hydrocarbons
  • Phenanthrenes
  • Polycyclic Aromatic Hydrocarbons
  • Pyrenes
  • RNA, Ribosomal, 16S
  • Water Pollutants
  • pyrene
  • n-hexadecane

Grants and funding