Discovery of a selective catalytic p300/CBP inhibitor that targets lineage-specific tumours

Nature. 2017 Oct 5;550(7674):128-132. doi: 10.1038/nature24028. Epub 2017 Sep 27.

Abstract

The dynamic and reversible acetylation of proteins, catalysed by histone acetyltransferases (HATs) and histone deacetylases (HDACs), is a major epigenetic regulatory mechanism of gene transcription and is associated with multiple diseases. Histone deacetylase inhibitors are currently approved to treat certain cancers, but progress on the development of drug-like histone actyltransferase inhibitors has lagged behind. The histone acetyltransferase paralogues p300 and CREB-binding protein (CBP) are key transcriptional co-activators that are essential for a multitude of cellular processes, and have also been implicated in human pathological conditions (including cancer). Current inhibitors of the p300 and CBP histone acetyltransferase domains, including natural products, bi-substrate analogues and the widely used small molecule C646, lack potency or selectivity. Here, we describe A-485, a potent, selective and drug-like catalytic inhibitor of p300 and CBP. We present a high resolution (1.95 Å) co-crystal structure of a small molecule bound to the catalytic active site of p300 and demonstrate that A-485 competes with acetyl coenzyme A (acetyl-CoA). A-485 selectively inhibited proliferation in lineage-specific tumour types, including several haematological malignancies and androgen receptor-positive prostate cancer. A-485 inhibited the androgen receptor transcriptional program in both androgen-sensitive and castration-resistant prostate cancer and inhibited tumour growth in a castration-resistant xenograft model. These results demonstrate the feasibility of using small molecule inhibitors to selectively target the catalytic activity of histone acetyltransferases, which may provide effective treatments for transcriptional activator-driven malignancies and diseases.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Acetyl Coenzyme A / metabolism
  • Animals
  • Antineoplastic Agents / chemistry
  • Antineoplastic Agents / pharmacology
  • Antineoplastic Agents / therapeutic use
  • Binding, Competitive
  • Biocatalysis / drug effects
  • Catalytic Domain / drug effects
  • Cell Line, Tumor
  • Cell Lineage* / drug effects
  • Cell Proliferation / drug effects
  • Crystallography, X-Ray
  • Enzyme Inhibitors / pharmacology
  • Enzyme Inhibitors / therapeutic use
  • Gene Expression Regulation, Neoplastic / drug effects
  • Hematologic Neoplasms / drug therapy
  • Hematologic Neoplasms / enzymology
  • Hematologic Neoplasms / pathology
  • Heterocyclic Compounds, 4 or More Rings / chemistry
  • Heterocyclic Compounds, 4 or More Rings / pharmacology*
  • Heterocyclic Compounds, 4 or More Rings / therapeutic use*
  • Histone Acetyltransferases / antagonists & inhibitors*
  • Histone Acetyltransferases / chemistry
  • Histone Acetyltransferases / metabolism
  • Humans
  • Male
  • Mice
  • Mice, SCID
  • Models, Molecular
  • Neoplasms / drug therapy*
  • Neoplasms / enzymology
  • Neoplasms / pathology*
  • Prostatic Neoplasms, Castration-Resistant / drug therapy
  • Prostatic Neoplasms, Castration-Resistant / enzymology
  • Prostatic Neoplasms, Castration-Resistant / pathology
  • Protein Conformation
  • Receptors, Androgen / metabolism
  • Xenograft Model Antitumor Assays
  • p300-CBP Transcription Factors / antagonists & inhibitors*
  • p300-CBP Transcription Factors / chemistry
  • p300-CBP Transcription Factors / metabolism

Substances

  • A-485 compound
  • Antineoplastic Agents
  • Enzyme Inhibitors
  • Heterocyclic Compounds, 4 or More Rings
  • Receptors, Androgen
  • Acetyl Coenzyme A
  • Histone Acetyltransferases
  • p300-CBP Transcription Factors