Caecibacterium sporoformans gen. nov., sp. nov., an anaerobic, butyrate-producing, spore-forming bacterium isolated from chicken caecum

Int J Syst Evol Microbiol. 2017 Nov;67(11):4589-4594. doi: 10.1099/ijsem.0.002338. Epub 2017 Sep 27.

Abstract

Strains of a Gram-stain-negative, rod-shaped and immotile bacterium were isolated from broiler chicken caecal content. The isolates required strict anaerobic conditions for growth, formed spores, were catalase-positive and oxidase-negative. They produced butyrate as the major metabolic end product in reinforced clostridial medium broth. The genomic DNA G+C content of the isolated strains was 32.5-34.6 mol%. The major cellular fatty acids were C16 : 0 FAME, C14 : 0 FAME, C19 : 0CYC 9,10DMA and C16 : 0DMA. The fatty acid composition of the cell wall showed no similarity to any strain in the midi database. 16S rRNA gene sequence analysis showed that the nearest phylogenetic neighbours were Anaerostipes hadrus and Clostridium populeti (92 % sequence similarity) within Clostridium cluster XIVa of the phylum Firmicutes. Therefore, a novel genus is proposed, with the name Caecibacterium sporoformans gen. nov., sp. nov. The type strain of Caecibacterium sporoformans is LMG 27730T=DSM 26959T.

Keywords: Clostridium cluster XIVa; anaerobe; caecum; chicken; spore-former.

MeSH terms

  • Animals
  • Bacterial Typing Techniques
  • Base Composition
  • Belgium
  • Butyrates / metabolism
  • Cecum / microbiology*
  • Chickens / microbiology*
  • DNA, Bacterial / genetics
  • Eubacterium / classification*
  • Eubacterium / genetics
  • Eubacterium / isolation & purification
  • Fatty Acids / chemistry
  • Phylogeny*
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA

Substances

  • Butyrates
  • DNA, Bacterial
  • Fatty Acids
  • RNA, Ribosomal, 16S