Chemoenzymatic Synthesis and Applications of Prokaryote-Specific UDP-Sugars

Methods Enzymol. 2017:597:145-186. doi: 10.1016/bs.mie.2017.06.003. Epub 2017 Jul 5.

Abstract

This method describes the chemoenzymatic synthesis of several nucleotide sugars, which are essential substrates in the biosynthesis of prokaryotic N- and O-linked glycoproteins. Protein glycosylation is now known to be widespread in prokaryotes and proceeds via sequential action of several enzymes, utilizing both common and modified prokaryote-specific sugar nucleotides. The latter, which include UDP-hexoses such as UDP-diNAc-bacillosamine (UDP-diNAcBac), UDP-diNAcAlt, and UDP-2,3-diNAcManA, are also important components of other bacterial and archaeal glycoconjugates. The ready availability of these "high-value" intermediates will enable courses of study into inhibitor screening, glycoconjugate biosynthesis pathway discovery, and unnatural carbohydrate incorporation toward metabolic engineering.

Keywords: 2,3-di-N-acetyl-glucuronic acid; 2,4-di-N-acetyl-bacillosamine; Chemoenzymatic synthesis; Glycoconjugate biosynthesis; Nucleotide-activated carbohydrates; Pseudaminic acid.

MeSH terms

  • Archaea / chemistry
  • Archaea / genetics
  • Bacteria / chemistry
  • Bacteria / genetics
  • Carbohydrates / biosynthesis*
  • Carbohydrates / chemistry
  • Carbohydrates / genetics
  • Glycoconjugates / biosynthesis
  • Glycoconjugates / chemistry
  • Glycoconjugates / genetics*
  • Glycoproteins / chemistry
  • Glycoproteins / genetics
  • Glycosylation
  • Metabolic Engineering / methods*
  • Nucleotides / biosynthesis
  • Nucleotides / chemistry
  • Nucleotides / genetics
  • Uridine Diphosphate Sugars / biosynthesis*
  • Uridine Diphosphate Sugars / chemistry
  • Uridine Diphosphate Sugars / genetics

Substances

  • Carbohydrates
  • Glycoconjugates
  • Glycoproteins
  • Nucleotides
  • Uridine Diphosphate Sugars