Automated computer-assisted quantitative analysis of intact murine lungs at the alveolar scale

PLoS One. 2017 Sep 21;12(9):e0183979. doi: 10.1371/journal.pone.0183979. eCollection 2017.

Abstract

Using state-of-the-art X-ray tomographic microscopy we can image lung tissue in three dimensions in intact animals down to a micrometer precision. The structural complexity and hierarchical branching scheme of the lung at this level of details, however, renders the extraction of biologically relevant quantities particularly challenging. We have developed a methodology for a detailed description of lung inflation patterns by measuring the size and the local curvature of the parenchymal airspaces. These quantitative tools for morphological and topological analyses were applied to high-resolution murine 3D lung image data, inflated at different pressure levels under immediate post mortem conditions. We show for the first time direct indications of heterogeneous intra-lobar and inter-lobar distension patterns at the alveolar level. Furthermore, we did not find any indication that a cyclic opening-and-collapse (recruitment) of a large number of alveoli takes place.

MeSH terms

  • Animals
  • Automation
  • Imaging, Three-Dimensional / methods*
  • Mice
  • Microscopy
  • Pulmonary Alveoli / diagnostic imaging*
  • Tomography, X-Ray Computed

Grants and funding

The study was supported by the National Competence Center in Biomedical Imaging (NCCBI, http://www.nccbi.ch/), grant No. 1126.0076 (M.S), and the Swiss National Science Foundation (SNF, http://www.snf.ch/), grant No. CR23I2-135550 (M.S.) with partial contribution from grant No. 310030-153468 (J.C.S). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.