Direct Head-to-Head Evaluation of Recombinant Adeno-associated Viral Vectors Manufactured in Human versus Insect Cells

Mol Ther. 2017 Dec 6;25(12):2661-2675. doi: 10.1016/j.ymthe.2017.08.003. Epub 2017 Aug 10.

Abstract

The major drawback of the Baculovirus/Sf9 system for recombinant adeno-associated viral (rAAV) manufacturing is that most of the Bac-derived rAAV vector serotypes, with few exceptions, demonstrate altered capsid compositions and lower biological potencies. Here, we describe a new insect cell-based production platform utilizing attenuated Kozak sequence and a leaky ribosome scanning to achieve a serotype-specific modulation of AAV capsid proteins stoichiometry. By way of example, rAAV5 and rAAV9 were produced and comprehensively characterized side by side with HEK293-derived vectors. A mass spectrometry analysis documented a 3-fold increase in both viral protein (VP)1 and VP2 capsid protein content compared with human cell-derived vectors. Furthermore, we conducted an extensive analysis of encapsidated single-stranded viral DNA using next-generation sequencing and show a 6-fold reduction in collaterally packaged contaminating DNA for rAAV5 produced in insect cells. Consequently, the re-designed rAAVs demonstrated significantly higher biological potencies, even in a comparison with HEK293-manufactured rAAVs mediating, in the case of rAAV5, 4-fold higher transduction of brain tissues in mice. Thus, the described system yields rAAV vectors of superior infectivity and higher genetic identity providing a scalable platform for good manufacturing practice (GMP)-grade vector production.

Keywords: AAV; gene therapy; obesity.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Capsid Proteins / chemistry
  • Capsid Proteins / genetics
  • Cell Culture Techniques*
  • Cell Line
  • Dependovirus / classification
  • Dependovirus / genetics*
  • Dependovirus / physiology
  • Gene Expression
  • Gene Order
  • Genes, Reporter
  • Genetic Vectors / genetics*
  • HEK293 Cells
  • Humans
  • Mice
  • Sf9 Cells
  • Tissue Distribution
  • Transduction, Genetic
  • Viral Load
  • Virus Replication*

Substances

  • Capsid Proteins