Nitrogenase Assembly: Strategies and Procedures

Methods Enzymol. 2017:595:261-302. doi: 10.1016/bs.mie.2017.07.006. Epub 2017 Aug 21.

Abstract

Nitrogenase is a metalloenzyme system that plays a critical role in biological nitrogen fixation, and the study of how its metallocenters are assembled into functional entities to facilitate the catalytic reduction of dinitrogen to ammonia is an active area of interest. The diazotroph Azotobacter vinelandii is especially amenable to culturing and genetic manipulation, and this organism has provided the basis for many insights into the assembly of nitrogenase proteins and their respective metallocofactors. This chapter will cover the basic procedures necessary for growing A. vinelandii cultures and subsequent recombinant transformation and protein expression techniques. Furthermore, protocols for nitrogenase protein purification and substrate reduction activity assays are described. These methods provide a solid framework for the assessment of nitrogenase assembly and catalysis.

Keywords: Assembly; Azotobacter vinelandii; Diazotroph; Fe protein; Genetics; MoFe protein; Nitrogen fixation; Nitrogenase; nif.

MeSH terms

  • Ammonia / metabolism
  • Azotobacter vinelandii / enzymology*
  • Azotobacter vinelandii / genetics
  • Azotobacter vinelandii / growth & development
  • Bacterial Proteins / biosynthesis
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / genetics
  • Bacterial Proteins / isolation & purification
  • Biocatalysis
  • Iron / metabolism
  • Metalloproteins / biosynthesis*
  • Metalloproteins / chemistry*
  • Metalloproteins / genetics
  • Metalloproteins / isolation & purification
  • Molybdoferredoxin / chemistry
  • Molybdoferredoxin / metabolism
  • Nitrogen / metabolism
  • Nitrogenase / biosynthesis*
  • Nitrogenase / chemistry*
  • Nitrogenase / genetics
  • Nitrogenase / isolation & purification
  • Protein Conformation

Substances

  • Bacterial Proteins
  • Metalloproteins
  • Molybdoferredoxin
  • Ammonia
  • Iron
  • Nitrogenase
  • Nitrogen