Spatial Distribution Patterns of Root-Associated Bacterial Communities Mediated by Root Exudates in Different Aged Ratooning Tea Monoculture Systems

Int J Mol Sci. 2017 Aug 8;18(8):1727. doi: 10.3390/ijms18081727.

Abstract

Positive plant-soil feedback depends on beneficial interactions between roots and microbes for nutrient acquisition; growth promotion; and disease suppression. Recent pyrosequencing approaches have provided insight into the rhizosphere bacterial communities in various cropping systems. However; there is a scarcity of information about the influence of root exudates on the composition of root-associated bacterial communities in ratooning tea monocropping systems of different ages. In Southeastern China; tea cropping systems provide the unique natural experimental environment to compare the distribution of bacterial communities in different rhizo-compartments. High performance liquid chromatography-electrospray ionization-mass spectrometry (HPLC-ESI-MS) was performed to identify and quantify the allelochemicals in root exudates. A high-throughput sequence was used to determine the structural dynamics of the root-associated bacterial communities. Although soil physiochemical properties showed no significant differences in nutrients; long-term tea cultivation resulted in the accumulation of catechin-containing compounds in the rhizosphere and a lowering of pH. Moreover; distinct distribution patterns of bacterial taxa were observed in all three rhizo-compartments of two-year and 30-year monoculture tea; mediated strongly by soil pH and catechin-containing compounds. These results will help to explore the reasons why soil quality and fertility are disturbed in continuous ratooning tea monocropping systems; and to clarify the associated problems.

Keywords: allelochemicals; high performance liquid chromatography-electrospray ionization-mass spectrometry (HPLC–ESI–MS); high-throughput sequence; microbiomes; monoculture; redundancy analysis (RDA); rhizo-compartments.

MeSH terms

  • Bacteria / classification*
  • Bacteria / genetics
  • Biodiversity
  • Chromatography, High Pressure Liquid
  • Cluster Analysis
  • Computational Biology / methods
  • Exudates and Transudates*
  • High-Throughput Nucleotide Sequencing
  • Metagenome
  • Metagenomics / methods
  • Plant Roots / chemistry*
  • Plant Roots / microbiology*
  • Rhizosphere*
  • Soil / chemistry
  • Soil Microbiology
  • Spectrometry, Mass, Electrospray Ionization
  • Tea*

Substances

  • Soil
  • Tea