Increased baseline RUNX2, caspase 3 and p21 gene expressions in the peripheral blood of disease-modifying anti-rheumatic drug-naïve rheumatoid arthritis patients are associated with improved clinical response to methotrexate therapy

Int J Rheum Dis. 2017 Oct;20(10):1468-1480. doi: 10.1111/1756-185X.13131. Epub 2017 Jul 25.

Abstract

Objective: To investigate the potential of the baseline gene expression in the whole blood of disease-modifying anti-rheumatic drug-naïve rheumatoid arthritis (RA) patients for predicting the response to methotrexate (MTX) treatment.

Methods: Twenty-six control subjects and 40 RA patients were examined. Clinical, immunological and radiographic parameters were assessed before and after 24 months of follow-up. The gene expressions in the whole blood were measured using real-time reverse transcription polymerase chain reaction. The protein concentrations in peripheral blood mononuclear cells were quantified using enzyme-linked immunosorbent assay. Receiver operating characteristic curve analyses were used to suggest thresholds that were associated with the prediction of the response.

Results: Decreases in the disease activity at the end of the study were accompanied by significant increases in joint space narrowing score (JSN). Positive correlations between the expressions of the Unc-51-like kinase 1 (ULK1) and matrix metalloproteinase 9 (MMP-9) genes with the level of C-reactive protein and MMP-9 expression with Disease Activity Score of 28 joints (DAS28) and swollen joint count were noted at baseline. The baseline tumor necrosis factor (TNF)α gene expression was positively correlated with JSN at the end of the follow-up, whereas p21, caspase 3, and runt-related transcription factor (RUNX)2 were correlated with the ΔDAS28 values.

Conclusions: Our results suggest that the expressions of MMP-9 and ULK1 might be associated with disease activity. Increased baseline gene expressions of RUNX2, p21 and caspase 3 in the peripheral blood might predict better responses to MTX therapy.

Keywords: disease activity; gene expression; methotrexate; rheumatoid arthritis; whole blood.

MeSH terms

  • Adolescent
  • Adult
  • Aged
  • Antirheumatic Agents / adverse effects
  • Antirheumatic Agents / therapeutic use*
  • Area Under Curve
  • Arthritis, Rheumatoid / blood
  • Arthritis, Rheumatoid / diagnosis
  • Arthritis, Rheumatoid / drug therapy*
  • Arthritis, Rheumatoid / genetics
  • Autophagy-Related Protein-1 Homolog / blood
  • Autophagy-Related Protein-1 Homolog / genetics
  • Biomarkers / blood
  • Case-Control Studies
  • Caspase 3 / blood*
  • Caspase 3 / genetics
  • Core Binding Factor Alpha 1 Subunit / blood*
  • Core Binding Factor Alpha 1 Subunit / genetics
  • Cyclin-Dependent Kinase Inhibitor p21 / blood*
  • Cyclin-Dependent Kinase Inhibitor p21 / genetics
  • Female
  • Gene Expression Profiling
  • Humans
  • Intracellular Signaling Peptides and Proteins / blood
  • Intracellular Signaling Peptides and Proteins / genetics
  • Joints / diagnostic imaging
  • Joints / drug effects
  • Male
  • Matrix Metalloproteinase 9 / blood
  • Matrix Metalloproteinase 9 / genetics
  • Methotrexate / adverse effects
  • Methotrexate / therapeutic use*
  • Middle Aged
  • Predictive Value of Tests
  • ROC Curve
  • Time Factors
  • Transcriptome
  • Treatment Outcome
  • Up-Regulation
  • Young Adult

Substances

  • Antirheumatic Agents
  • Biomarkers
  • CDKN1A protein, human
  • Core Binding Factor Alpha 1 Subunit
  • Cyclin-Dependent Kinase Inhibitor p21
  • Intracellular Signaling Peptides and Proteins
  • RUNX2 protein, human
  • Autophagy-Related Protein-1 Homolog
  • ULK1 protein, human
  • CASP3 protein, human
  • Caspase 3
  • MMP9 protein, human
  • Matrix Metalloproteinase 9
  • Methotrexate