Determination of the Absolute Configuration of (-)-Hydroxynitrilaphos and Related Biosynthetic Questions

Chemistry. 2017 Nov 7;23(62):15655-15665. doi: 10.1002/chem.201702904. Epub 2017 Sep 25.

Abstract

The ongoing search for bioactive natural products has led to the development of new genome-based screening approaches to identify possible phosphonate producing microorganisms. From the identified phosphonate producers, several until now unknown phosphonic acid natural products were isolated, including (hydroxy)nitrilaphos (4 and 5) and (hydroxy)phosphonocystoximate (7 and 6). We present the synthesis of phosphonocystoximate via an aldoxime intermediate. Chlorination and coupling with methyl N-acetylcysteinate furnished 6 after global deprotection. The obtained experimental data confirm the previously assigned structure of the natural product. We were also able to determine the absolute configuration of (-)-hydroxynitrilaphos. Chiral resolution of diethyl cyanohydroxymethylphosphonate (24) with Noe's lactol furnished both enantiomers of 4. Conversion of (+)-24 to (R)-2-amino-1-hydroxyethylphosphonic acid by reduction of the cyano-group showed (-)-hydroxynitrilaphos ultimately to be S-configured. Further, we present a 13 C-isotope labeling strategy for 4 and 5 that will possibly solve the question of whether hydroxynitrilaphos is a biosynthetic intermediate or a downstream product of hydroxyphosphonocystoximate biosynthesis.

Keywords: biosynthesis; hydroxynitrilaphos; natural products; nitriles; phosphonates.

MeSH terms

  • Biological Products / chemical synthesis
  • Biological Products / chemistry
  • Biological Products / metabolism*
  • Carbon Isotopes / chemistry
  • Isotope Labeling
  • Magnetic Resonance Spectroscopy
  • Molecular Conformation
  • Nitriles / chemical synthesis
  • Nitriles / chemistry*
  • Phosphorous Acids / chemistry
  • Spectrometry, Mass, Electrospray Ionization
  • Stereoisomerism

Substances

  • Biological Products
  • Carbon Isotopes
  • Nitriles
  • Phosphorous Acids
  • phosphonic acid
  • Carbon-13