Sortase Transpeptidases: Structural Biology and Catalytic Mechanism

Adv Protein Chem Struct Biol. 2017:109:223-264. doi: 10.1016/bs.apcsb.2017.04.008. Epub 2017 Jun 5.

Abstract

Gram-positive bacteria use sortase cysteine transpeptidase enzymes to covalently attach proteins to their cell wall and to assemble pili. In pathogenic bacteria sortases are potential drug targets, as many of the proteins that they display on the microbial surface play key roles in the infection process. Moreover, the Staphylococcus aureus Sortase A (SaSrtA) enzyme has been developed into a valuable biochemical reagent because of its ability to ligate biomolecules together in vitro via a covalent peptide bond. Here we review what is known about the structures and catalytic mechanism of sortase enzymes. Based on their primary sequences, most sortase homologs can be classified into six distinct subfamilies, called class A-F enzymes. Atomic structures reveal unique, class-specific variations that support alternate substrate specificities, while structures of sortase enzymes bound to sorting signal mimics shed light onto the molecular basis of substrate recognition. The results of computational studies are reviewed that provide insight into how key reaction intermediates are stabilized during catalysis, as well as the mechanism and dynamics of substrate recognition. Lastly, the reported in vitro activities of sortases are compared, revealing that the transpeptidation activity of SaSrtA is at least 20-fold faster than other sortases that have thus far been characterized. Together, the results of the structural, computational, and biochemical studies discussed in this review begin to reveal how sortases decorate the microbial surface with proteins and pili, and may facilitate ongoing efforts to discover therapeutically useful small molecule inhibitors.

Keywords: Mechanism; Sortase; Structure; Transpeptidase.

Publication types

  • Review

MeSH terms

  • Aminoacyltransferases / chemistry*
  • Aminoacyltransferases / metabolism*
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / metabolism*
  • Catalytic Domain
  • Cysteine Endopeptidases / chemistry*
  • Cysteine Endopeptidases / metabolism*
  • Gram-Positive Bacteria / chemistry
  • Gram-Positive Bacteria / enzymology*
  • Gram-Positive Bacteria / metabolism
  • Gram-Positive Bacterial Infections / microbiology
  • Humans
  • Models, Molecular
  • Protein Conformation
  • Staphylococcal Infections / microbiology
  • Staphylococcus aureus / chemistry
  • Staphylococcus aureus / enzymology
  • Staphylococcus aureus / metabolism
  • Substrate Specificity

Substances

  • Bacterial Proteins
  • Aminoacyltransferases
  • sortase A
  • Cysteine Endopeptidases