Evidence for Adaptive Introgression of Disease Resistance Genes Among Closely Related Arabidopsis Species

G3 (Bethesda). 2017 Aug 7;7(8):2677-2683. doi: 10.1534/g3.117.043984.

Abstract

The generation and maintenance of functional variation in the pathogen defense system of plants is central to the constant evolutionary battle between hosts and parasites. If a species is susceptible to a given pathogen, hybridization and subsequent introgression of a resistance allele from a related species can potentially be an important source of new immunity and is therefore expected to be selected for in a process referred to as adaptive introgression. Here, we survey sequence variation in 10 resistance (R-) genes and compare them with 37 reference genes in natural populations of the two closely related and interfertile species: Arabidopsis lyrata and A. halleri The R-genes are highly polymorphic in both species and show clear signs of trans-species polymorphisms. We show that A. lyrata and A. halleri have had a history of limited introgression for the reference genes. For the R-genes, the introgression rate has been significantly higher than for the reference genes, resulting in fewer fixed differences between species and a higher sharing of identical haplotypes. We conclude that R-genes likely cross the species boundaries at a higher rate than reference genes and therefore also that some of the increased diversity and trans-specific polymorphisms in R-genes is due to adaptive introgression.

Keywords: Arabidopsis; introgression; pathogen resistance genes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adaptation, Physiological / genetics*
  • Arabidopsis / genetics*
  • Base Sequence
  • Disease Resistance / genetics*
  • Genes, Plant*
  • Genetic Loci
  • Genetic Speciation
  • Inbreeding*
  • Plant Diseases / genetics
  • Polymorphism, Genetic
  • Species Specificity