DNA methylation patterns in ulcerative colitis-associated cancer: a systematic review

Epigenomics. 2017 Jul;9(7):1029-1042. doi: 10.2217/epi-2017-0025. Epub 2017 Jun 16.

Abstract

Background: Evidence points to the role of DNA methylation in ulcerative colitis (UC)-associated cancer (UCC), the most serious complication of ulcerative colitis. A better understanding of the etiology of UCC may facilitate the development of new therapeutic targets and help to identify biomarkers of the disease risk.

Methods: A search was performed in three databases following PRISMA protocol. DNA methylation in UCC was compared with sporadic colorectal cancer (SCRC), and individual genes differently methylated in UCC identified.

Results: While there were some similarities in the methylation patterns of UCC compared with SCRC, generally lower levels of hypermethylation in promoter regions of individual genes was evident in UCC. Certain individual genes are, however, highly methylated in colitis-associated cancer: RUNX3, MINT1, MYOD and p16 exon1 and the promoter regions of EYA4 and ESR.

Conclusion: Patterns of DNA methylation differ between UCC and SCRC. Seven genes appear to be promising putative biomarkers.

Keywords: DNA methylation; cancer epigenetics; ulcerative colitis.

Publication types

  • Meta-Analysis
  • Review
  • Systematic Review

MeSH terms

  • Adaptor Proteins, Signal Transducing / genetics
  • Biomarkers, Tumor / genetics*
  • Colitis, Ulcerative / complications*
  • Colorectal Neoplasms / etiology
  • Colorectal Neoplasms / genetics*
  • Colorectal Neoplasms / pathology
  • Core Binding Factor Alpha 3 Subunit / genetics
  • DNA Methylation*
  • Female
  • Humans
  • Male
  • MyoD Protein / genetics
  • Nerve Tissue Proteins / genetics
  • Trans-Activators / genetics

Substances

  • APBA1 protein, human
  • Adaptor Proteins, Signal Transducing
  • Biomarkers, Tumor
  • Core Binding Factor Alpha 3 Subunit
  • EYA4 protein, human
  • MyoD Protein
  • MyoD1 myogenic differentiation protein
  • Nerve Tissue Proteins
  • Runx3 protein, human
  • Trans-Activators