Anti-Restriction Protein, KlcAHS, Promotes Dissemination of Carbapenem Resistance

Front Cell Infect Microbiol. 2017 May 2:7:150. doi: 10.3389/fcimb.2017.00150. eCollection 2017.

Abstract

Carbapenemase-producing Klebsiella pneumoniae (KPC) has emerged and spread throughout the world. A retrospective analysis was performed on carbapenem-resistant K. pneumoniae isolated at our teaching hospital during the period 2009-2010, when the initial outbreak occurred. To determine the mechanism(s) that underlies the increased infectivity exhibited by KPC, Multilocus Sequence Typing (MLST) was conducted. A series of plasmids was also extracted, sequenced and analyzed. Concurrently, the complete sequences of blaKPC-2-harboring plasmids deposited in GenBank were summarized and aligned. The blaKPC-2 and KlcAHS genes in the carbapenem-resistant K. pneumoniae isolates were examined. E. coli strains, carrying different Type I Restriction and Modification (RM) systems, were selected to study the interaction between RM systems, anti-RM systems and horizontal gene transfer (HGT). The ST11 clone predominated among 102 carbapenem-resistant K. pneumoniae isolates, all harbored the blaKPC-2 gene; 98% contained the KlcAHS gene. KlcAHS was one of the core genes in the backbone region of most blaKPC-2 carrying plasmids. Type I RM systems in the host bacteria reduced the rate of pHS10842 plasmid transformation by 30- to 40-fold. Presence of the anti-restriction protein, KlcAHS, on the other hand, increased transformation efficiency by 3- to 6-fold. These results indicate that RM systems can significantly restrict HGT. In contrast, KlcAHS can disrupt the RM systems and promote HGT by transformation. These findings suggest that the anti-restriction protein, KlcAHS, represents a novel mechanism that facilitates the increased transfer of blaKPC-2 and KlcAHS -carrying plasmids among K. pneumoniae strains.

Keywords: Type I RM systems; K. pneumoniae; KlcAHS; horizontal gene transfer; transformation.

MeSH terms

  • Bacterial Proteins / genetics*
  • Carbapenem-Resistant Enterobacteriaceae / drug effects*
  • Carbapenem-Resistant Enterobacteriaceae / genetics
  • Carbapenems / pharmacology
  • China
  • Escherichia coli / genetics
  • Gene Transfer, Horizontal / drug effects*
  • Gene Transfer, Horizontal / genetics
  • Genes, Bacterial / genetics
  • Humans
  • Klebsiella Infections / epidemiology
  • Klebsiella Infections / microbiology
  • Klebsiella pneumoniae / drug effects*
  • Klebsiella pneumoniae / genetics*
  • Klebsiella pneumoniae / isolation & purification
  • Microbial Sensitivity Tests
  • Molecular Epidemiology
  • Multilocus Sequence Typing
  • Plasmids / genetics
  • Recombinant Proteins / genetics
  • Retrospective Studies
  • Sequence Alignment
  • Sequence Analysis, DNA
  • Transformation, Genetic / drug effects
  • Transformation, Genetic / genetics
  • Viral Proteins / pharmacology*
  • beta-Lactamases / genetics*

Substances

  • Bacterial Proteins
  • Carbapenems
  • Recombinant Proteins
  • Viral Proteins
  • anti-restriction proteins
  • beta-Lactamases
  • carbapenemase