Improved n-butanol production via co-expression of membrane-targeted tilapia metallothionein and the clostridial metabolic pathway in Escherichia coli

BMC Biotechnol. 2017 Apr 11;17(1):36. doi: 10.1186/s12896-017-0356-3.

Abstract

Background: N-Butanol has favorable characteristics for use as either an alternative fuel or platform chemical. Bio-based n-butanol production using microbes is an emerging technology that requires further development. Although bio-industrial microbes such as Escherichia coli have been engineered to produce n-butanol, reactive oxygen species (ROS)-mediated toxicity may limit productivity. Previously, we show that outer-membrane-targeted tilapia metallothionein (OmpC-TMT) is more effective as an ROS scavenger than human and mouse metallothioneins to reduce oxidative stress in the host cell.

Results: The host strain (BUT1-DE) containing the clostridial n-butanol pathway displayed a decreased growth rate and limited n-butanol productivity, likely due to ROS accumulation. The clostridial n-butanol pathway was co-engineered with inducible OmpC-TMT in E. coli (BUT3-DE) for simultaneous ROS removal, and its effect on n-butanol productivity was examined. The ROS scavenging ability of cells overexpressing OmpC-TMT was examined and showed an approximately twofold increase in capacity. The modified strain improved n-butanol productivity to 320 mg/L, whereas the control strain produced only 95.1 mg/L. Transcriptomic analysis revealed three major KEGG pathways that were significantly differentially expressed in the BUT3-DE strain compared with their expression in the BUT1-DE strain, including genes involved in oxidative phosphorylation, fructose and mannose metabolism and glycolysis/gluconeogenesis.

Conclusions: These results indicate that OmpC-TMT can increase n-butanol production by scavenging ROS. The transcriptomic analysis suggested that n-butanol causes quinone malfunction, resulting in oxidative-phosphorylation-related nuo operon downregulation, which would diminish the ability to convert NADH to NAD+ and generate proton motive force. However, fructose and mannose metabolism-related genes (fucA, srlE and srlA) were upregulated, and glycolysis/gluconeogenesis-related genes (pfkB, pgm) were downregulated, which further assisted in regulating NADH/NAD+ redox and preventing additional ATP depletion. These results indicated that more NADH and ATP were required in the n-butanol synthetic pathway. Our study demonstrates a potential approach to increase the robustness of microorganisms and the production of toxic chemicals through the ability to reduce oxidative stress.

Keywords: E. coli; OmpC; Oxidative stress; Tilapia metallothionein; Transcriptomic analysis; n-butanol.

MeSH terms

  • 1-Butanol / isolation & purification
  • 1-Butanol / metabolism*
  • Animals
  • Cell Membrane / metabolism
  • Clostridium / enzymology*
  • Clostridium / genetics
  • Escherichia coli / physiology*
  • Gene Expression Regulation, Bacterial / physiology
  • Genetic Enhancement / methods
  • Metallothionein / genetics
  • Metallothionein / metabolism*
  • Porins / genetics
  • Porins / metabolism*
  • Protein Engineering / methods
  • Signal Transduction / genetics
  • Tilapia / genetics
  • Tilapia / metabolism*

Substances

  • OmpC protein
  • Porins
  • 1-Butanol
  • Metallothionein