Characterization of Phytophthora infestans populations in northwestern Algeria during 2008-2014

Fungal Biol. 2017 May;121(5):467-477. doi: 10.1016/j.funbio.2017.01.004. Epub 2017 Feb 6.

Abstract

A total of 161 Phytophthora infestans isolates, collected from infected potato and tomato plants during 2008-2014, were characterized based on mating type, metalaxyl sensitivity and polymorphism at 12 simple sequence repeat (SSR) loci, in order to investigate the population of P. infestans in the north-west of Algeria, an emerging potato production region. The majority of isolates were of A2 mating type (112 isolates). A high percentage (89 %) of resistance to metalaxyl among isolates was detected. The metalaxyl resistant phenotype was present in both mating types with a higher percentage in A2 mating type isolates. SSR-based genotypic analysis of P. infestans population showed a low diversity. Genotype 13_A2 was the predominant in the population with a frequency of 67 % followed by 2_A1 (21 %) and 23_A1 (5 %). Genotype 23_A1 was detected only in tomato and potato isolates collected in 2013 and 2014.

Keywords: Late blight; Mating type; Metalaxyl; Potato; SSR markers; Tomato.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alanine / analogs & derivatives
  • Alanine / metabolism
  • Algeria
  • Drug Resistance, Fungal
  • Fungicides, Industrial / metabolism
  • Genes, Mating Type, Fungal
  • Phytophthora infestans / classification*
  • Phytophthora infestans / genetics
  • Phytophthora infestans / isolation & purification*
  • Phytophthora infestans / physiology
  • Polymorphism, Genetic
  • Solanum lycopersicum / microbiology
  • Solanum tuberosum / microbiology

Substances

  • Fungicides, Industrial
  • metalaxyl
  • Alanine