Methods for Identifying and Examining HTLV-1 HBZ Post-translational Modifications

Methods Mol Biol. 2017:1582:111-126. doi: 10.1007/978-1-4939-6872-5_9.

Abstract

Post-translational modifications (PTMs) are chemical alterations to individual amino acids that alter a protein's conformation, stability, and/or function. Several pathogenic viruses have been shown to encode proteins with PTMs, including human T-cell leukemia virus type 1 (HTLV-1) Tax and Rex regulatory proteins. HTLV-1 basic leucine zipper protein (HBZ) was hypothesized to feature PTMs due to its functional activities and interactions with cellular transcription factors and acetyltransferases. Here, we describe the approach used to identify, via mass spectrometry, the PTMs of HBZ. In addition, we describe methods to determine the functional relevance of the identified PTMs.

Keywords: HBZ; HTLV-1; IRF-1; Mass spectrometry; NF-κB; Post-translational modifications; c-Jun.

MeSH terms

  • Acyltransferases / genetics
  • Acyltransferases / metabolism
  • Basic-Leucine Zipper Transcription Factors / genetics
  • Basic-Leucine Zipper Transcription Factors / metabolism*
  • Gene Products, rex / genetics
  • Gene Products, rex / metabolism
  • Gene Products, tax / genetics
  • Gene Products, tax / metabolism
  • HEK293 Cells
  • Human T-lymphotropic virus 1 / genetics
  • Human T-lymphotropic virus 1 / metabolism*
  • Humans
  • Mass Spectrometry / methods*
  • Protein Processing, Post-Translational*
  • Retroviridae Proteins / genetics
  • Retroviridae Proteins / metabolism*

Substances

  • Basic-Leucine Zipper Transcription Factors
  • Gene Products, rex
  • Gene Products, tax
  • HBZ protein, human T-cell leukemia virus type I
  • Retroviridae Proteins
  • rex Protein, Human T-lymphotropic virus 1
  • tax protein, Human T-lymphotrophic virus 1
  • Acyltransferases