Rational drug design of indazole-based diarylurea derivatives as anticancer agents

Chem Biol Drug Des. 2017 Oct;90(4):609-617. doi: 10.1111/cbdd.12984. Epub 2017 May 2.

Abstract

A series of novel indazole-based diarylurea derivatives targeting c-kit were designed by structure-based drug design. The derivatives were prepared, and their antiproliferative activities were evaluated against human colon cancer HCT-116 cell line and hepatocellular carcinoma PLC/PRF/5 cell line. The antiproliferative activities demonstrated that six of nine compounds exhibited comparable activities with sorafenib against HCT-116. The structure-activity relationship (SAR) analysis indicated that the indazole ring part tolerated different kinds of substituents, and the N position of the central pyridine ring played key roles in antiproliferative activity. The SAR and interaction mechanisms were further explored using molecular docking method. Compound 1i with N-(2-(pyrrolidin-1-yl)ethyl)-carboxamide possessed improved solubility, 596.1 ng/ml and best activities, IC50 at 1.0 μm against HCT-116, and 3.48 μm against PLC/PRF/5. It is a promising anticancer agent for further development.

Keywords: anticancer agent; antiproliferative activity; diarylurea derivative; molecular docking; rational drug design.

MeSH terms

  • Antineoplastic Agents / chemistry*
  • Antineoplastic Agents / pharmacology*
  • Cell Line, Tumor
  • Cell Proliferation / drug effects
  • Computer-Aided Design
  • Drug Design
  • Drug Screening Assays, Antitumor
  • HCT116 Cells
  • Humans
  • Indazoles / chemistry*
  • Indazoles / pharmacology*
  • Molecular Docking Simulation
  • Neoplasms / drug therapy
  • Neoplasms / metabolism
  • Niacinamide / analogs & derivatives
  • Niacinamide / pharmacology
  • Phenylurea Compounds / pharmacology
  • Proto-Oncogene Proteins c-kit / metabolism
  • Sorafenib
  • Structure-Activity Relationship
  • Urea / analogs & derivatives*
  • Urea / pharmacology*

Substances

  • Antineoplastic Agents
  • Indazoles
  • Phenylurea Compounds
  • Niacinamide
  • Urea
  • Sorafenib
  • Proto-Oncogene Proteins c-kit