Circulating tumour DNA reflects treatment response and clonal evolution in chronic lymphocytic leukaemia

Nat Commun. 2017 Mar 17:8:14756. doi: 10.1038/ncomms14756.

Abstract

Several novel therapeutics are poised to change the natural history of chronic lymphocytic leukaemia (CLL) and the increasing use of these therapies has highlighted limitations of traditional disease monitoring methods. Here we demonstrate that circulating tumour DNA (ctDNA) is readily detectable in patients with CLL. Importantly, ctDNA does not simply mirror the genomic information contained within circulating malignant lymphocytes but instead parallels changes across different disease compartments following treatment with novel therapies. Serial ctDNA analysis allows clonal dynamics to be monitored over time and identifies the emergence of genomic changes associated with Richter's syndrome (RS). In addition to conventional disease monitoring, ctDNA provides a unique opportunity for non-invasive serial analysis of CLL for molecular disease monitoring.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenine / analogs & derivatives
  • Aged
  • Aged, 80 and over
  • Antineoplastic Agents / therapeutic use
  • Ataxia Telangiectasia Mutated Proteins / genetics
  • Baculoviral IAP Repeat-Containing 3 Protein / genetics
  • Bridged Bicyclo Compounds, Heterocyclic / therapeutic use
  • Circulating Tumor DNA / blood
  • Circulating Tumor DNA / genetics*
  • Clonal Evolution / genetics*
  • Disease Progression
  • Female
  • Humans
  • Leukemia, Lymphocytic, Chronic, B-Cell / blood
  • Leukemia, Lymphocytic, Chronic, B-Cell / drug therapy
  • Leukemia, Lymphocytic, Chronic, B-Cell / genetics*
  • Male
  • Middle Aged
  • Myeloid Differentiation Factor 88 / genetics
  • Phosphoproteins / genetics
  • Piperidines
  • Proto-Oncogene Proteins p21(ras) / genetics
  • Pyrazoles / therapeutic use
  • Pyrimidines / therapeutic use
  • RNA Splicing Factors / genetics
  • Receptor, Notch1 / genetics
  • Sulfonamides / therapeutic use
  • Treatment Outcome
  • Tumor Suppressor Protein p53 / genetics

Substances

  • Antineoplastic Agents
  • Bridged Bicyclo Compounds, Heterocyclic
  • Circulating Tumor DNA
  • KRAS protein, human
  • MYD88 protein, human
  • Myeloid Differentiation Factor 88
  • NOTCH1 protein, human
  • Phosphoproteins
  • Piperidines
  • Pyrazoles
  • Pyrimidines
  • RNA Splicing Factors
  • Receptor, Notch1
  • SF3B1 protein, human
  • Sulfonamides
  • TP53 protein, human
  • Tumor Suppressor Protein p53
  • ibrutinib
  • BIRC3 protein, human
  • Baculoviral IAP Repeat-Containing 3 Protein
  • ATM protein, human
  • Ataxia Telangiectasia Mutated Proteins
  • Proto-Oncogene Proteins p21(ras)
  • Adenine
  • venetoclax