An In Silico Identification of Common Putative Vaccine Candidates against Treponema pallidum: A Reverse Vaccinology and Subtractive Genomics Based Approach

Int J Mol Sci. 2017 Feb 14;18(2):402. doi: 10.3390/ijms18020402.

Abstract

Sexually transmitted infections (STIs) are caused by a wide variety of bacteria, viruses, and parasites that are transmitted from one person to another primarily by vaginal, anal, or oral sexual contact. Syphilis is a serious disease caused by a sexually transmitted infection. Syphilis is caused by the bacterium Treponema pallidum subspecies pallidum. Treponema pallidum (T. pallidum) is a motile, gram-negative spirochete, which can be transmitted both sexually and from mother to child, and can invade virtually any organ or structure in the human body. The current worldwide prevalence of syphilis emphasizes the need for continued preventive measures and strategies. Unfortunately, effective measures are limited. In this study, we focus on the identification of vaccine targets and putative drugs against syphilis disease using reverse vaccinology and subtractive genomics. We compared 13 strains of T. pallidum using T. pallidum Nichols as the reference genome. Using an in silicoapproach, four pathogenic islands were detected in the genome of T. pallidum Nichols. We identified 15 putative antigenic proteins and sixdrug targets through reverse vaccinology and subtractive genomics, respectively, which can be used as candidate therapeutic targets in the future.

Keywords: drug target; sexually transmitted infections (STIs); vaccine target.

MeSH terms

  • Antigens, Bacterial / chemistry
  • Antigens, Bacterial / genetics
  • Antigens, Bacterial / immunology*
  • Bacterial Vaccines / genetics
  • Bacterial Vaccines / immunology*
  • Computational Biology / methods
  • Computer Simulation*
  • Epitope Mapping* / methods
  • Genome, Bacterial
  • Genomic Islands
  • Genomics / methods
  • Models, Molecular
  • Structure-Activity Relationship
  • Syphilis / prevention & control*
  • Treponema pallidum / genetics
  • Treponema pallidum / immunology*

Substances

  • Antigens, Bacterial
  • Bacterial Vaccines