Multiple functional self-association interfaces in plant TIR domains

Proc Natl Acad Sci U S A. 2017 Mar 7;114(10):E2046-E2052. doi: 10.1073/pnas.1621248114. Epub 2017 Feb 3.

Abstract

The self-association of Toll/interleukin-1 receptor/resistance protein (TIR) domains has been implicated in signaling in plant and animal immunity receptors. Structure-based studies identified different TIR-domain dimerization interfaces required for signaling of the plant nucleotide-binding oligomerization domain-like receptors (NLRs) L6 from flax and disease resistance protein RPS4 from Arabidopsis Here we show that the crystal structure of the TIR domain from the Arabidopsis NLR suppressor of npr1-1, constitutive 1 (SNC1) contains both an L6-like interface involving helices αD and αE (DE interface) and an RPS4-like interface involving helices αA and αE (AE interface). Mutations in either the AE- or DE-interface region disrupt cell-death signaling activity of SNC1, L6, and RPS4 TIR domains and full-length L6 and RPS4. Self-association of L6 and RPS4 TIR domains is affected by mutations in either region, whereas only AE-interface mutations affect SNC1 TIR-domain self-association. We further show two similar interfaces in the crystal structure of the TIR domain from the Arabidopsis NLR recognition of Peronospora parasitica 1 (RPP1). These data demonstrate that both the AE and DE self-association interfaces are simultaneously required for self-association and cell-death signaling in diverse plant NLRs.

Keywords: NLR; TIR domain; plant disease resistance; plant immunity; signaling by cooperative assembly formation.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Arabidopsis / genetics*
  • Arabidopsis / immunology
  • Arabidopsis / microbiology
  • Arabidopsis Proteins / chemistry*
  • Arabidopsis Proteins / genetics
  • Arabidopsis Proteins / immunology
  • Binding Sites
  • Cell Death / genetics
  • Cell Death / immunology
  • Flax / genetics
  • Flax / immunology
  • Flax / microbiology
  • Gene Expression Regulation, Plant*
  • Host-Pathogen Interactions
  • Models, Molecular
  • Mutation
  • Nicotiana / genetics
  • Nicotiana / immunology
  • Nicotiana / microbiology
  • Peronospora / pathogenicity
  • Peronospora / physiology
  • Plant Diseases / genetics*
  • Plant Diseases / immunology
  • Plant Diseases / microbiology
  • Plant Immunity / genetics
  • Plant Proteins / chemistry*
  • Plant Proteins / genetics
  • Plant Proteins / immunology
  • Protein Binding
  • Protein Interaction Domains and Motifs
  • Protein Structure, Secondary
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / immunology
  • Sequence Alignment
  • Sequence Homology, Amino Acid
  • Signal Transduction

Substances

  • Arabidopsis Proteins
  • L6 protein, Linum usitatissimum
  • NPR1 protein, Arabidopsis
  • Plant Proteins
  • Recombinant Proteins
  • SNC1 protein, Arabidopsis
  • rps4 protein, plant

Associated data

  • PDB/5TEB
  • PDB/5TEC