Complete nucleotide sequence of clematis chlorotic mottle virus, a new member of the family Tombusviridae

Arch Virol. 2017 May;162(5):1373-1379. doi: 10.1007/s00705-017-3236-1. Epub 2017 Jan 30.

Abstract

Clematis chlorotic mottle virus (ClCMV) is a previously undescribed virus associated with symptoms of yellow mottling and veining, chlorotic ring spots, line pattern mosaics, and flower distortion and discoloration on ornamental Clematis. The ClCMV genome is 3,880 nt in length with five open reading frames (ORFs) encoding a 27-kDa protein (ORF 1), an 87-kDa replicase protein (ORF 2), two centrally located movement proteins (ORF 3 and 4), and a 37-kDa capsid protein (ORF 5). Based on morphological, genomic, and phylogenetic analysis, ClCMV is predicted to be a member of the genus Pelarspovirus in the family Tombusviridae.

MeSH terms

  • Base Sequence
  • Capsid Proteins / genetics*
  • Clematis / virology*
  • Genome, Viral
  • Open Reading Frames / genetics
  • Phylogeny
  • RNA, Viral / genetics
  • RNA-Dependent RNA Polymerase / genetics*
  • Sequence Analysis, RNA
  • Tombusviridae / classification*
  • Tombusviridae / genetics*

Substances

  • Capsid Proteins
  • RNA, Viral
  • RNA-Dependent RNA Polymerase