Genotypic characterization of quinolone resistant-Escherichia coli isolates from retail food in Morocco

J Environ Sci Health B. 2017 Feb;52(2):107-114. doi: 10.1080/03601234.2016.1239985. Epub 2016 Oct 24.

Abstract

This study was conducted to assess the retail food as a possible vehicle for antimicrobial resistant, particularly quinolones resistant and pathogenic Escherichia coli. We determined the prevalence and characteristics of nalidixic acid (Nal) resistant E. coli isolates from diverse retail food samples. In all, 70 (28%) of 250 E. coli isolates studied were Nal-resistant E. coli and 91% of these were multi-drug resistant. Plasmid mediated quinolone resistance genes were identified in 32 isolates, including aac(6')-Ib-cr (n = 16), qnrS1 (n = 11) and qnrB19 (n = 7). Mutations in gyr A and par C genes were detected among 80% of the isolates, and the isolates showed substitution Ser83-Leu and Asp87-Asn in gyrA and Ser80-Ile in parC. In addition, three different gene cassettes were identified (aadA1, aadA7, aac(3)-Id) in 18%. Virulence-associated genes stx1, eae, sfa, hlyA and stx2 were found in six (8%), three (4%), two (3%), three (4%) and three (4%) isolates, respectively. E. coli isolates of phylogenetic group A were dominant (64%, 45/70). Pulsed field gel electrophoresis revealed none epidemiological relationship between these isolates. The results of this work report the higher frequency of Nal-resistant E. coli isolates from Moroccan retail food samples including MDR and pathogenic isolates.

Keywords: E. coli; Morocco; PFGE; quinolone-resistance; retail food; virulence genes.

MeSH terms

  • Anti-Bacterial Agents / pharmacology
  • DNA Gyrase / genetics
  • Drug Resistance, Bacterial / genetics*
  • Drug Resistance, Multiple, Bacterial / drug effects
  • Drug Resistance, Multiple, Bacterial / genetics
  • Electrophoresis, Gel, Pulsed-Field
  • Escherichia coli / drug effects*
  • Escherichia coli / genetics*
  • Escherichia coli / isolation & purification
  • Escherichia coli / pathogenicity
  • Food Microbiology*
  • Humans
  • Morocco
  • Mutation
  • Nalidixic Acid / pharmacology*
  • Phylogeny
  • Plasmids
  • Quinolones / pharmacology
  • Virulence / genetics

Substances

  • Anti-Bacterial Agents
  • Quinolones
  • Nalidixic Acid
  • DNA Gyrase