Advances in analytical methodologies to guide bioprocess engineering for bio-therapeutics

Methods. 2017 Mar 1:116:63-83. doi: 10.1016/j.ymeth.2016.11.002. Epub 2016 Nov 8.

Abstract

This study was performed to monitor the glycoform distribution of a recombinant antibody fusion protein expressed in CHO cells over the course of fed-batch bioreactor runs using high-throughput methods to accurately determine the glycosylation status of the cell culture and its product. Three different bioreactors running similar conditions were analysed at the same five time-points using the advanced methods described here. N-glycans from cell and secreted glycoproteins from CHO cells were analysed by HILIC-UPLC and MS, and the total glycosylation (both N- and O-linked glycans) secreted from the CHO cells were analysed by lectin microarrays. Cell glycoproteins contained mostly high mannose type N-linked glycans with some complex glycans; sialic acid was α-(2,3)-linked, galactose β-(1,4)-linked, with core fucose. Glycans attached to secreted glycoproteins were mostly complex with sialic acid α-(2,3)-linked, galactose β-(1,4)-linked, with mostly core fucose. There were no significant differences noted among the bioreactors in either the cell pellets or supernatants using the HILIC-UPLC method and only minor differences at the early time-points of days 1 and 3 by the lectin microarray method. In comparing different time-points, significant decreases in sialylation and branching with time were observed for glycans attached to both cell and secreted glycoproteins. Additionally, there was a significant decrease over time in high mannose type N-glycans from the cell glycoproteins. A combination of the complementary methods HILIC-UPLC and lectin microarrays could provide a powerful and rapid HTP profiling tool capable of yielding qualitative and quantitative data for a defined biopharmaceutical process, which would allow valuable near 'real-time' monitoring of the biopharmaceutical product.

Keywords: Bioprocess engineering; CHO cells; Glycosylation; HILIC; Lectin microarrays; UPLC.

MeSH terms

  • Animals
  • Antibodies / chemistry
  • Antibodies / genetics*
  • Batch Cell Culture Techniques
  • Bioreactors
  • CHO Cells
  • Carbohydrate Sequence
  • Chromatography, High Pressure Liquid / methods
  • Cricetulus
  • Glycosylation
  • Hydrophobic and Hydrophilic Interactions
  • Lectins / chemistry*
  • Lectins / isolation & purification
  • Polysaccharides / chemistry*
  • Polysaccharides / isolation & purification
  • Protein Array Analysis / instrumentation*
  • Recombinant Fusion Proteins / biosynthesis
  • Recombinant Fusion Proteins / chemistry
  • Recombinant Fusion Proteins / genetics*
  • Recombinant Fusion Proteins / metabolism
  • Sialic Acids / chemistry*
  • Sialic Acids / isolation & purification

Substances

  • Antibodies
  • Lectins
  • Polysaccharides
  • Recombinant Fusion Proteins
  • Sialic Acids