Genetic variants associated with gastrointestinal symptoms in Fabry disease

Oncotarget. 2016 Dec 27;7(52):85895-85904. doi: 10.18632/oncotarget.13135.

Abstract

Gastrointestinal symptoms (GIS) are often among the earliest presenting events in Fabry disease (FD), an X-linked lysosomal disorder caused by the deficiency of α-galactosidase A. Despite recent advances in clinical and molecular characterization of FD, the pathophysiology of the GIS is still poorly understood. To shed light either on differential clinical presentation or on intervariability of GIS in FD, we genotyped 1936 genetic markers across 231 genes that encode for drug-metabolizing enzymes and drug transport proteins in 49 FD patients, using the DMET Plus platform. All nine single nucleotide polymorphisms (SNPs) mapped within four genes showed statistically significant differences in genotype frequencies between FD patients who experienced GIS and patients without GIS: ABCB11 (odd ratio (OR) = 18.07, P = 0,0019; OR = 8.21, P = 0,0083; OR=8.21, P = 0,0083; OR = 8.21, P = 0,0083),SLCO1B1 (OR = 9.23, P = 0,0065; OR = 5.08, P = 0,0289; OR = 8.21, P = 0,0083), NR1I3 (OR = 5.40, P = 0,0191) and ABCC5 (OR = 14.44, P = 0,0060). This is the first study that investigates the relationships between genetic heterogeneity in drug absorption, distribution, metabolism and excretion (ADME) related genes and GIS in FD. Our findings provide a novel genetic variant framework which warrants further investigation for precision medicine in FD.

Keywords: DMET; Fabry disease; bile acids; gastrointestinal symptoms; genetic polymorphisms.

MeSH terms

  • ATP Binding Cassette Transporter, Subfamily B, Member 11 / genetics
  • Adult
  • Constitutive Androstane Receptor
  • Fabry Disease / complications
  • Fabry Disease / genetics*
  • Female
  • Gastrointestinal Diseases / genetics*
  • Genetic Variation
  • Genotyping Techniques
  • Humans
  • Male
  • Middle Aged
  • Polymorphism, Single Nucleotide*
  • Precision Medicine

Substances

  • ABCB11 protein, human
  • ATP Binding Cassette Transporter, Subfamily B, Member 11
  • Constitutive Androstane Receptor
  • NR1I3 protein, human