13C kinetic isotope effects on the reaction of a flavin amine oxidase determined from whole molecule isotope effects

Arch Biochem Biophys. 2016 Dec 15:612:115-119. doi: 10.1016/j.abb.2016.10.018. Epub 2016 Nov 1.

Abstract

A large number of flavoproteins catalyze the oxidation of amines. Because of the importance of these enzymes in metabolism, their mechanisms have previously been studied using deuterium, nitrogen, and solvent isotope effects. While these results have been valuable for computational studies to distinguish among proposed mechanisms, a measure of the change at the reacting carbon has been lacking. We describe here the measurement of a 13C kinetic isotope effect for a representative amine oxidase, polyamine oxidase. The isotope effect was determined by analysis of the isotopic composition of the unlabeled substrate, N, N'-dibenzyl-1,4-diaminopropane, to obtain a pH-independent value of 1.025. The availability of a 13C isotope effect for flavoprotein-catalyzed amine oxidation provides the first measure of the change in bond order at the carbon involved in this carbon-hydrogen bond cleavage and will be of value to understanding the transition state structure for this class of enzymes.

Keywords: Dehydrogenase; Enzyme mechanisms; Flavoprotein; Polyamine oxidase.

MeSH terms

  • Animals
  • Carbon Isotopes / chemistry*
  • Escherichia coli / metabolism
  • Flavins / chemistry*
  • Flavoproteins / chemistry
  • Hydrogen-Ion Concentration
  • Kinetics
  • Mass Spectrometry
  • Mice
  • Monoamine Oxidase / chemistry*
  • Oxidoreductases / chemistry
  • Oxidoreductases Acting on CH-NH Group Donors / chemistry
  • Polyamine Oxidase
  • Polyamines / chemistry
  • Temperature

Substances

  • Carbon Isotopes
  • Flavins
  • Flavoproteins
  • Polyamines
  • Oxidoreductases
  • Monoamine Oxidase
  • Oxidoreductases Acting on CH-NH Group Donors