Interferon lambda 4 expression is suppressed by the host during viral infection

J Exp Med. 2016 Nov 14;213(12):2539-2552. doi: 10.1084/jem.20160437. Epub 2016 Oct 31.

Abstract

Interferon (IFN) lambdas are critical antiviral effectors in hepatic and mucosal infections. Although IFNλ1, IFNλ2, and IFNλ3 act antiviral, genetic association studies have shown that expression of the recently discovered IFNL4 is detrimental to hepatitis C virus (HCV) infection through a yet unknown mechanism. Intriguingly, human IFNL4 harbors a genetic variant that introduces a premature stop codon. We performed a molecular and biochemical characterization of IFNλ4 to determine its role and regulation of expression. We found that IFNλ4 exhibits similar antiviral activity to IFNλ3 without negatively affecting antiviral IFN activity or cell survival. We show that humans deploy several mechanisms to limit expression of functional IFNλ4 through noncoding splice variants and nonfunctional protein isoforms. Furthermore, protein-coding IFNL4 mRNA are not loaded onto polyribosomes and lack a strong polyadenylation signal, resulting in poor translation efficiency. This study provides mechanistic evidence that humans suppress IFNλ4 expression, suggesting that immune function is dependent on other IFNL family members.

MeSH terms

  • Alternative Splicing / genetics
  • Animals
  • Antiviral Agents / pharmacology
  • Base Sequence
  • Cell Death / drug effects
  • Cell Line, Tumor
  • Extracellular Space / metabolism
  • Frameshift Mutation / genetics
  • Hepacivirus / drug effects
  • Host-Pathogen Interactions* / drug effects
  • Humans
  • Interferons
  • Interleukins / metabolism*
  • Interleukins / pharmacology
  • Intracellular Space / metabolism
  • Models, Biological
  • Pathogen-Associated Molecular Pattern Molecules / metabolism
  • Protein Biosynthesis / drug effects
  • Protein Isoforms / metabolism
  • Receptors, Cytokine / metabolism
  • Receptors, Interferon
  • Recombinant Proteins / pharmacology
  • Signal Transduction / drug effects
  • Virus Diseases / metabolism*

Substances

  • Antiviral Agents
  • interferon-lambda, human
  • IFNL4 protein, human
  • IFNLR1 protein, human
  • Interleukins
  • Pathogen-Associated Molecular Pattern Molecules
  • Protein Isoforms
  • Receptors, Cytokine
  • Receptors, Interferon
  • Recombinant Proteins
  • Interferons