Novel bead-based platform for direct detection of unlabelled nucleic acids through Single Nucleobase Labelling

Talanta. 2016 Dec 1:161:489-496. doi: 10.1016/j.talanta.2016.08.072. Epub 2016 Aug 31.

Abstract

Over the last decade, circulating microRNAs have received attention as diagnostic and prognostic biomarkers. In particular, microRNA122 has been demonstrated to be an early and more sensitive indicator of drug-induced liver injury than the widely used biomarkers such as alanine aminotransferase and aspartate aminotransferase. Recently, microRNA122 has been used in vitro to assess the cellular toxicity of new drugs and as a biomarker for the development of a rapid test for drug overdose/liver damage. In this proof-of-concept study, we report a PCR-free and label-free detection method that has a limit of detection (3 standard deviations) of 15 fmoles of microRNA122, by integrating a dynamic chemical approach for "Single Nucleobase Labelling" with a bead-based platform (Luminex®) thereby, in principle, demonstrating the exciting prospect of rapid and accurate profiling of any microRNAs related to diseases and toxicology.

Keywords: Dynamic chemistry; Magnetic microspheres; MicroRNA (miRNA); Nucleic acid; Nucleic acid test (NAT); Peptide nucleic acid (PNA); Single Nucleobase Labelling (SNL).

MeSH terms

  • Biomarkers
  • Limit of Detection
  • MicroRNAs / analysis*
  • Microspheres
  • Nucleic Acid Probes
  • Peptide Nucleic Acids

Substances

  • Biomarkers
  • MicroRNAs
  • Nucleic Acid Probes
  • Peptide Nucleic Acids