Role of non-coding RNA transcription around gene regulatory elements in transcription factor recruitment

RNA Biol. 2017 Jan 2;14(1):1-5. doi: 10.1080/15476286.2016.1248020. Epub 2016 Oct 20.

Abstract

Eukaryotic cells produce a variety of non-coding RNAs (ncRNAs), many of which have been shown to play pivotal roles in biological processes such as differentiation, maintenance of pluripotency of stem cells, and cellular response to various stresses. Genome-wide analyses have revealed that many ncRNAs are transcribed around regulatory DNA elements located proximal or distal to gene promoters, but their biological functions are largely unknown. Recently, it has been demonstrated in yeast and mouse that ncRNA transcription around gene promoters and enhancers facilitates DNA binding of transcription factors to their target sites. These results suggest universal roles of promoter/enhancer-associated ncRNAs in the recruitment of transcription factors to their binding sites.

Keywords: Corepressor; enhancer; gene expression; ncRNA; promoter; transcription factor.

Publication types

  • Review

MeSH terms

  • Animals
  • Enhancer Elements, Genetic
  • Gene Expression Regulation*
  • Humans
  • Mice
  • Promoter Regions, Genetic
  • Protein Binding
  • RNA, Untranslated / genetics*
  • Regulatory Sequences, Nucleic Acid*
  • Schizosaccharomyces / genetics
  • Schizosaccharomyces / metabolism
  • Transcription Factors / metabolism*
  • Transcription, Genetic*

Substances

  • RNA, Untranslated
  • Transcription Factors