Binding interactions between enantiomeric α-aminophosphonate derivatives and tobacco mosaic virus coat protein

Int J Biol Macromol. 2017 Jan;94(Pt A):603-610. doi: 10.1016/j.ijbiomac.2016.10.027. Epub 2016 Oct 13.

Abstract

Tobacco mosaic virus (TMV) is an important plant virus that can cause considerable crop loss. Our group synthesized a series of enantiomeric α-aminophosphonate derivatives with high anti-TMV activities. The activity of (R)-diphenyl-1-(4-methylbenzothiazole-2-amino)-1-(thiphene-2-yl)-methylphosphonate (Q-R) was found to be superior to that of (S)-diphenyl-1-(4-methyl benzothiazole-2-amino)-1-(thiphene-2-yl)-methylphosphonate (Q-S). However, the mechanism for inhibition of the R-isomer (Q-R) of infection activity is not clear. Thus, we studied the interactions between Q-R and Q-S and TMV by using TMV coat proteins (CP) as a potential target for fluorescence spectroscopy, isothermal titration calorimetry, microscale thermophoresis, and molecular docking. Arg90 was found to play a major role in the interaction of Q-R with TMV CP, as demonstrated by the interaction experiments and the results of molecular modeling. The substitution of arginine with glycine resulted in a mutant that was significantly less sensitive to Q-R. These results indicate that Q-R undermines the structural stability of the TMV R90G virus particle by binding with Arg90, eventually leading to the loss of the virus' ability for infection.

Keywords: Arg90; Enantiomeric α-aminophosphonate derivatives; Interactions; TMV CP.

MeSH terms

  • Amino Acid Substitution
  • Antiviral Agents / chemical synthesis
  • Antiviral Agents / chemistry*
  • Arginine / chemistry*
  • Capsid Proteins / chemistry*
  • Capsid Proteins / genetics
  • Gene Expression
  • Glycine / chemistry*
  • Molecular Docking Simulation
  • Organophosphonates / chemical synthesis
  • Organophosphonates / chemistry*
  • Protein Binding
  • Protein Structure, Secondary
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Spectrometry, Fluorescence
  • Stereoisomerism
  • Structure-Activity Relationship
  • Tobacco Mosaic Virus / chemistry*

Substances

  • Antiviral Agents
  • Capsid Proteins
  • Organophosphonates
  • Recombinant Proteins
  • Arginine
  • Glycine