SAGA complex and Gcn5 are necessary for respiration in budding yeast

Biochim Biophys Acta. 2016 Dec;1863(12):3160-3168. doi: 10.1016/j.bbamcr.2016.10.002. Epub 2016 Oct 11.

Abstract

In budding yeast, growth through fermentation and/or respiration is dependent on the type of carbon source present in the medium. SAGA complex is the main acetylation complex and is required, together with Rtg factors, for nucleus-mitochondria communication and transcriptional activation of specific nuclear genes. Even though acetylation is necessary for mitochondria activity and respiratory pathways the direct role of histone acetyltransferases and SAGA complex has never been investigated directly. In this study we demonstrate, for the first time, that Gcn5 and SAGA are needed for respiratory metabolism and oxygen consumption. According to a central role for acetylation in respiration we find that the Gcn5 inhibitor CPTH2 had higher efficacy on cells grown in glycerol containing media. We also demonstrated that the opposing activities of Gcn5 and Hda1 modify selectively H3-AcK18 and are essential for respiration. Taken together our results suggest a novel paradigm coupling acetyltransferase activity to respiratory metabolism. Correspondingly we propose the selective utilization of KAT inhibitor CPTH2, combined to the modulation of the respiratory metabolism of the cell, as a promising novel tool of intervention in cancer cells.

Keywords: Acetylation; Carbon source; Gcn5; Hda1; Respiration; SAGA complex; Yeast.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetylation
  • Cell Nucleus / metabolism
  • Cell Respiration / drug effects
  • Cell Respiration / genetics*
  • Culture Media / chemistry
  • Glycerol / metabolism
  • Glycerol / pharmacology
  • Histone Acetyltransferases / genetics*
  • Histone Acetyltransferases / metabolism
  • Histone Deacetylases / genetics
  • Histone Deacetylases / metabolism
  • Histones / genetics
  • Histones / metabolism
  • Mitochondria / metabolism
  • Oxygen Consumption / drug effects
  • Oxygen Consumption / genetics
  • Saccharomyces cerevisiae / drug effects
  • Saccharomyces cerevisiae / genetics*
  • Saccharomyces cerevisiae / metabolism
  • Saccharomyces cerevisiae Proteins / genetics*
  • Saccharomyces cerevisiae Proteins / metabolism
  • Trans-Activators / genetics*
  • Trans-Activators / metabolism
  • Transcriptional Activation / drug effects

Substances

  • Culture Media
  • Histones
  • SAGA complex, S cerevisiae
  • Saccharomyces cerevisiae Proteins
  • Trans-Activators
  • GCN5 protein, S cerevisiae
  • Histone Acetyltransferases
  • HDA1 protein, S cerevisiae
  • Histone Deacetylases
  • Glycerol