The Modes of Action of ChiIII, a Chitinase from Mushroom Coprinopsis cinerea, Shift with Changes in the Length of GlcNAc Oligomers

J Agric Food Chem. 2016 Sep 21;64(37):6958-68. doi: 10.1021/acs.jafc.6b03086. Epub 2016 Sep 8.

Abstract

A putative class III endochitinase (ChiIII) was reported previously to be expressed dominantly in fruiting bodies of Coprinopsis cinerea, and its expression levels increased with the maturation of the fruiting bodies. This paper further reports that ChiIII is a novel chitinase with exo- and endoactivities. When the substrate was (GlcNAc)3-5, ChiIII exhibited exoactivity, releasing GlcNAc processively from the reducing end of (GlcNAc)3-5; when the substrate was (GlcNAc)6-7, the activity of ChiIII shifted to an endoacting enzyme, randomly splitting chitin oligosaccharides to various shorter oligosaccharides. This shift in the mode of action of ChiIII may be related to its stronger hydrolytic capacity to degrade chitin in fungal cell walls. The predicted structure of ChiIII shows that it lacks the α+β domain insertion; however, its substrate binding cleft seems to be deeper than that of common endochitinases but shallower and more open than that of common exochitinases, which may be related to its exo- and endohydrolytic activities.

Keywords: Coprinopsis cinerea; chitin; chitin oligosaccharide; chitinase; fungal cell walls.

MeSH terms

  • Acetylglucosamine / metabolism*
  • Agaricales / chemistry
  • Agaricales / enzymology*
  • Agaricales / genetics
  • Amino Acid Sequence
  • Chitin / chemistry
  • Chitin / metabolism
  • Chitinases / chemistry*
  • Chitinases / genetics
  • Chitinases / metabolism
  • Fungal Proteins / chemistry*
  • Fungal Proteins / genetics
  • Fungal Proteins / metabolism
  • Molecular Sequence Data
  • Oligosaccharides / chemistry*
  • Oligosaccharides / metabolism*
  • Substrate Specificity

Substances

  • Fungal Proteins
  • Oligosaccharides
  • Chitin
  • Chitinases
  • Acetylglucosamine