Two Unrelated Undervirilized 46,XY Males with Inherited NR5A1 Variants Identified by Whole-Exome Sequencing

Horm Res Paediatr. 2017;87(4):264-270. doi: 10.1159/000448754. Epub 2016 Aug 24.

Abstract

Background: Undervirilized 46,XY males with bifid scrotum often pose a diagnostic challenge, and the majority of cases typically do not receive a genetic diagnosis. NR5A1 mutations can be seen in 10-20% of the cases and are a relatively common cause of undervirilization.

Methods: Whole-exome sequencing was utilized to study 10 undervirilized 46,XY subjects with bifid scrotum.

Results: Exome sequencing identified novel NR5A1 variants, both affecting exon 7, in 2 of the 10 subjects with bifid scrotum. Subject 1 had a heterozygous frameshift variant, c.1150delC, p.Leu384fsTer1, within the ligand-binding domain inherited from his unaffected father. Subject 2 had a novel splice-site variant c.1139-2T>C, affecting the canonical splice acceptor site for exon 7 and also disrupting the ligand-binding domain. Both subjects had serum testosterone levels within the normal range as infants.

Conclusions: We describe two novel NR5A1 variants, demonstrating mutations in this gene as a common cause of milder cases of 46,XY undervirilization. Whole-exome sequencing results yielded the diagnosis in 2 out of 10 cases without a previous diagnosis, supporting the value of this approach. Significant genotype-phenotype variability was also noted with Subject 1's paternal inheritance from his unaffected father.

Keywords: NR5A1; Bifid scrotum; Disorders of sex development; Exome sequencing; Undervirilization.

Publication types

  • Case Reports

MeSH terms

  • 46, XX Disorders of Sex Development* / blood
  • 46, XX Disorders of Sex Development* / diagnosis
  • 46, XX Disorders of Sex Development* / genetics
  • 46, XX Disorders of Sex Development* / pathology
  • High-Throughput Nucleotide Sequencing*
  • Humans
  • Infant, Newborn
  • Male
  • Mutation*
  • RNA Splice Sites*
  • Steroidogenic Factor 1 / genetics*
  • Testosterone / blood*

Substances

  • NR5A1 protein, human
  • RNA Splice Sites
  • Steroidogenic Factor 1
  • Testosterone