Construction of BAC Libraries from Flow-Sorted Chromosomes

Methods Mol Biol. 2016:1429:135-49. doi: 10.1007/978-1-4939-3622-9_11.

Abstract

Cloned DNA libraries in bacterial artificial chromosome (BAC) are the most widely used form of large-insert DNA libraries. BAC libraries are typically represented by ordered clones derived from genomic DNA of a particular organism. In the case of large eukaryotic genomes, whole-genome libraries consist of a hundred thousand to a million clones, which make their handling and screening a daunting task. The labor and cost of working with whole-genome libraries can be greatly reduced by constructing a library derived from a smaller part of the genome. Here we describe construction of BAC libraries from mitotic chromosomes purified by flow cytometric sorting. Chromosome-specific BAC libraries facilitate positional gene cloning, physical mapping, and sequencing in complex plant genomes.

Keywords: BAC library; BAC vector; Chromosomes; Clone; DNA cloning; High molecular weight (HMW) DNA; Pulse-field gel electrophoresis (PFGE).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Chromosomes, Artificial, Bacterial*
  • Chromosomes, Plant*
  • Flow Cytometry / methods*
  • Genome, Plant
  • Genomic Library*
  • Plants / genetics*