A Novel Plasmid, pSx1, Harboring a New Tn1696 Derivative from Extensively Drug-Resistant Shewanella xiamenensis Encoding OXA-416

Microb Drug Resist. 2017 Jun;23(4):429-436. doi: 10.1089/mdr.2016.0025. Epub 2016 Aug 9.

Abstract

The whole genome sequencing of extensively drug-resistant Shewanella xiamenensis T17 isolated from hospital effluents in Algeria revealed the presence of a novel 268.4 kb plasmid designated pSx1, which carries several antibiotic-resistance genes in the novel Tn1696 derivative (Tn6297), in addition to the chromosomal blaOXA-48-like gene (blaOXA-416). The presence of the plasmid was confirmed by nuclease S1-PFGE analysis and transformation by electroporation into Escherichia coli DH10B. Tn6297 contains an In27 class 1 integron harboring the dfrA12-orfF-aadA2 array, msr(E) and mph(E) associated with IS26; a new efflux pump multidrug resistance composite transposon delimited by two ISEc29s; Tn-tet harboring tetR and tetA(C); a class 1 integron with the qacG gene cassette; qnrVC6 and dfrA23 associated with ISCR1; and a complex class 1 integron In4-like containing aacC1, aadA1, blaVEB-16, catA2, sul1Δ, cmlA9, tetR, tetA(G), aac(6')-II, and blaPSE-1. Its mer operon carries merB, but lacks merC, in contrast to Tn1696 and Tn21. This study represents the first characterization of a multidrug-resistant transposon and multidrug resistance plasmid in Shewanella and is the first report of blaOXA-416 in Algeria, providing evidence that Shewanella spp. could be an important reservoir and vehicle for drug resistance genes.

Keywords: Shewanella xiamenensis; Tn1696 derivative; blaOXA-48; plasmid pSx1.

MeSH terms

  • Algeria / epidemiology
  • Anti-Bacterial Agents / pharmacology
  • Cloning, Molecular
  • DNA Transposable Elements*
  • Drug Resistance, Multiple, Bacterial / genetics*
  • Electroporation
  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Gene Expression
  • Gram-Negative Bacterial Infections / drug therapy
  • Gram-Negative Bacterial Infections / epidemiology
  • Gram-Negative Bacterial Infections / microbiology
  • High-Throughput Nucleotide Sequencing
  • Hospitals
  • Humans
  • Integrons
  • Microbial Sensitivity Tests
  • Plasmids / chemistry
  • Plasmids / metabolism*
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Shewanella / drug effects
  • Shewanella / genetics*
  • Shewanella / isolation & purification
  • Shewanella / metabolism
  • Transformation, Bacterial
  • beta-Lactamases / genetics*
  • beta-Lactamases / metabolism

Substances

  • Anti-Bacterial Agents
  • DNA Transposable Elements
  • Recombinant Proteins
  • beta-Lactamases