Structure and Biosynthesis Gene Cluster of the O-Antigen of Escherichia coli O12

Biochemistry (Mosc). 2016 Apr;81(4):401-6. doi: 10.1134/S0006297916040106.

Abstract

Two polysaccharides were isolated from Escherichia coli O12, the major being identified as the O12-antigen and the minor as the K5-antigen. The polysaccharides were studied by sugar analysis, Smith degradation, and one- and two-dimensional (1)H and (13)C NMR spectroscopy. As a result, the following structure of the O12-polysaccharide was elucidated, which, to our knowledge, has not been hitherto found in bacterial carbohydrates: →2)-β-d-Glcp-(1→6)-α-d-GlcpNAc-(1→3)-α-l-FucpNAc-(1→3)-β-d-GlcpNAc-(1→. The →4)-β-d-GlcpA-(1→4)-α-d-GlcpNAc-(1→ structure established for the K5-polysaccharide (heparosan) is previously known. Functions of genes in the O-antigen biosynthesis gene cluster of E. coli O12 were assigned by comparison with sequences in the available databases and found to be consistent with the O12-polysaccharide structure.

MeSH terms

  • Carbohydrate Sequence
  • Carbon-13 Magnetic Resonance Spectroscopy
  • Databases, Chemical
  • Escherichia coli / genetics*
  • Escherichia coli / metabolism
  • Escherichia coli Proteins / genetics
  • Escherichia coli Proteins / metabolism
  • Lipopolysaccharides / chemistry
  • Lipopolysaccharides / isolation & purification
  • Molecular Sequence Data
  • Multigene Family / genetics*
  • O Antigens / chemistry*
  • O Antigens / genetics*
  • Polysaccharides / chemistry
  • Polysaccharides / isolation & purification
  • Proton Magnetic Resonance Spectroscopy

Substances

  • Escherichia coli Proteins
  • Lipopolysaccharides
  • O Antigens
  • Polysaccharides