An Arabidopsis SUMO E3 Ligase, SIZ1, Negatively Regulates Photomorphogenesis by Promoting COP1 Activity

PLoS Genet. 2016 Apr 29;12(4):e1006016. doi: 10.1371/journal.pgen.1006016. eCollection 2016 Apr.

Abstract

COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1), a ubiquitin E3 ligase, is a central negative regulator of photomorphogenesis. However, how COP1 activity is regulated by post-translational modifications remains largely unknown. Here we show that SUMO (small ubiquitin-like modifier) modification enhances COP1 activity. Loss-of-function siz1 mutant seedlings exhibit a weak constitutive photomorphogenic phenotype. SIZ1 physically interacts with COP1 and mediates the sumoylation of COP1. A K193R substitution in COP1 blocks its SUMO modification and reduces COP1 activity in vitro and in planta. Consistently, COP1 activity is reduced in siz1 and the level of HY5, a COP1 target protein, is increased in siz1. Sumoylated COP1 may exhibits higher transubiquitination activity than does non-sumoylated COP1, but SIZ1-mediated SUMO modification does not affect COP1 dimerization, COP1-HY5 interaction, and nuclear accumulation of COP1. Interestingly, prolonged light exposure reduces the sumoylation level of COP1, and COP1 mediates the ubiquitination and degradation of SIZ1. These regulatory mechanisms may maintain the homeostasis of COP1 activity, ensuing proper photomorphogenic development in changing light environment. Our genetic and biochemical studies identify a function for SIZ1 in photomorphogenesis and reveal a novel SUMO-regulated ubiquitin ligase, COP1, in plants.

MeSH terms

  • Amino Acid Substitution / genetics
  • Arabidopsis / genetics*
  • Arabidopsis / growth & development
  • Arabidopsis Proteins / genetics*
  • Arabidopsis Proteins / metabolism
  • Basic-Leucine Zipper Transcription Factors / genetics
  • Basic-Leucine Zipper Transcription Factors / metabolism
  • Gene Expression Regulation, Plant
  • Ligases / genetics*
  • Ligases / metabolism
  • Light
  • Mutation
  • Nuclear Proteins / genetics
  • Nuclear Proteins / metabolism
  • Plant Development / genetics*
  • Proteolysis
  • Seedlings / genetics
  • Seedlings / growth & development
  • Small Ubiquitin-Related Modifier Proteins / genetics
  • Small Ubiquitin-Related Modifier Proteins / metabolism
  • Sumoylation / genetics
  • Ubiquitin-Protein Ligases / genetics*
  • Ubiquitin-Protein Ligases / metabolism
  • Ubiquitination / genetics

Substances

  • Arabidopsis Proteins
  • Basic-Leucine Zipper Transcription Factors
  • HY5 protein, Arabidopsis
  • Nuclear Proteins
  • Small Ubiquitin-Related Modifier Proteins
  • AT2G32950 protein, Arabidopsis
  • Ubiquitin-Protein Ligases
  • Ligases
  • SIZ1 protein, Arabidopsis

Grants and funding

This work was supported by grants 31170170 and 31471363, from the National Natural Science Foundation of China (http://www.nsfc.gov.cn/), to JBJ. This work was also supported by grant 2012CB114302, from the Ministry of Science and Technology of the People’s Republic of China (http://www.most.gov.cn/eng/), and by grant XDA08010105, from the Chinese Academy of Sciences (http://www.cas.cn/), to JBJ. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.