Post-transcriptional regulation of Wnt co-receptor LRP6 and RNA-binding protein HuR by miR-29b in intestinal epithelial cells

Biochem J. 2016 Jun 1;473(11):1641-9. doi: 10.1042/BCJ20160057. Epub 2016 Apr 18.

Abstract

MicroRNAs (miRNAs) control gene expression by binding to their target mRNAs for degradation and/or translation repression and are implicated in many aspects of cellular physiology. Our previous study shows that miR-29b acts as a biological repressor of intestinal mucosal growth, but its exact downstream targets remain largely unknown. In the present study, we found that mRNAs, encoding Wnt co-receptor LRP6 (low-density lipoprotein-receptor-related protein 6) and RNA-binding protein (RBP) HuR, are novel targets of miR-29b in intestinal epithelial cells (IECs) and that expression of LRP6 and HuR is tightly regulated by miR-29b at the post-transcriptional level. miR-29b interacted with both Lrp6 and HuR mRNAs via their 3'-UTRs and inhibited LRP6 and HuR expression by destabilizing Lrp6 and HuR mRNAs and repressing their translation. Studies using heterologous reporter constructs revealed a greater repressive effect of miR-29b through a single binding site in the Lrp6 or HuR 3'-UTR, whereas deletion mutation of this site prevented miR-29b-induced repression of LRP6 and HuR expression. Repression of HuR by miR-29b in turn also contributed to miR-29b-induced LRP6 inhibition, since ectopic overexpression of HuR in cells overexpressing miR-29b restored LRP6 expression to near normal levels. Taken together, our results suggest that miR-29b inhibits expression of LRP6 and HuR post-transcriptionally, thus playing a role in the regulation of IEC proliferation and intestinal epithelial homoeostasis.

Keywords: Wnt signalling; intestinal epithelial homoeostasis; mRNA stability; non-coding RNAs; translation.

MeSH terms

  • 3' Untranslated Regions / genetics
  • Caco-2 Cells
  • ELAV-Like Protein 1 / genetics
  • ELAV-Like Protein 1 / metabolism*
  • Epithelial Cells / metabolism*
  • Gene Expression Regulation
  • Humans
  • Intestines / cytology*
  • Low Density Lipoprotein Receptor-Related Protein-6 / genetics
  • Low Density Lipoprotein Receptor-Related Protein-6 / metabolism*
  • MicroRNAs / genetics
  • MicroRNAs / metabolism*
  • Protein Binding
  • Protein Biosynthesis
  • RNA, Messenger / genetics

Substances

  • 3' Untranslated Regions
  • ELAV-Like Protein 1
  • LRP6 protein, human
  • Low Density Lipoprotein Receptor-Related Protein-6
  • MIRN29a microRNA, human
  • MicroRNAs
  • RNA, Messenger