Pitfalls in PCR troubleshooting: Expect the unexpected?

Biomol Detect Quantif. 2015 Dec 10:6:1-3. doi: 10.1016/j.bdq.2015.11.001. eCollection 2016 Jan.

Abstract

PCR is a well-understood and established laboratory technique often used in molecular diagnostics. Huge experience has been accumulated over the last years regarding the design of PCR assays and their set-up, including in-depth troubleshooting to obtain the optimal PCR assay for each purpose. Here we report a PCR troubleshooting that came up with a surprising result never observed before. With this report we hope to sensitize the reader to this peculiar problem and to save troubleshooting efforts in similar situations, especially in time-critical and ambitious diagnostic settings.

Keywords: PCR; PCR diagnostic; RT-PCR; Reaction mix; Real-time PCR; Troubleshooting.