Complete genome sequence of Frondihabitans sp. strain PAMC28766, a novel carotenoid-producing and radiation-resistant strain isolated from an Antarctic lichen

J Biotechnol. 2016 May 20:226:20-1. doi: 10.1016/j.jbiotec.2016.03.041. Epub 2016 Mar 23.

Abstract

Here, we report the first complete genome sequence of Frondihabitans sp. strain PAMC28766, which was found to consist of three plasmids, one chromosome (4,345,897bp), and a series of genes involved in carotenoid biosynthesis and nucleotide excision repair. An analysis of the Frondihabitans sp. PAMC28766 genome will improve our understanding of the carotenoid biosynthesis pathway. Furthermore, the sequence data will provide novel insight into UV radiation-resistance in extremely cold environments.

Keywords: Antarctica lichen Himantormia sp.; Carotenoid; Complete genome sequence; Frondihabitans sp. PAMC28766; Nucleotide excision repair.

MeSH terms

  • Actinomycetales / genetics*
  • Actinomycetales / isolation & purification*
  • Antarctic Regions
  • Base Sequence
  • Carotenoids / biosynthesis*
  • Chromosomes, Bacterial / genetics
  • Genome, Bacterial*
  • Lichens / microbiology*
  • Radiation Tolerance / genetics*

Substances

  • Carotenoids