Assessing protein-DNA interactions: Pros and cons of classic and emerging techniques

Yongyao Xie; Yao-Guang Liu; Letian Chen

doi:10.1007/s11427-016-5046-1

Assessing protein-DNA interactions: Pros and cons of classic and emerging techniques

Sci China Life Sci. 2016 Apr;59(4):425-7. doi: 10.1007/s11427-016-5046-1. Epub 2016 Mar 28.

Authors

Yongyao Xie^{1

2

3

4}, Yao-Guang Liu^{5

6

7}, Letian Chen^{8

9

10

11}

Affiliations

¹ State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, South China Agricultural University, Guangzhou, 510642, China.
² Guangdong Provincial Key Laboratory of Protein Function and Regulation in Agricultural Organisms, South China Agricultural University, Guangzhou, 510642, China.
³ Key Laboratory of Plant Functional Genomics and Biotechnology of Guangdong Provincial Higher Education Institutions, South China Agricultural University, Guangzhou, 510642, China.
⁴ College of Life Sciences, South China Agricultural University, Guangzhou, 510642, China.
⁵ State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, South China Agricultural University, Guangzhou, 510642, China. ygliu@scau.edu.cn.
⁶ Key Laboratory of Plant Functional Genomics and Biotechnology of Guangdong Provincial Higher Education Institutions, South China Agricultural University, Guangzhou, 510642, China. ygliu@scau.edu.cn.
⁷ College of Life Sciences, South China Agricultural University, Guangzhou, 510642, China. ygliu@scau.edu.cn.
⁸ State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, South China Agricultural University, Guangzhou, 510642, China. lotichen@scau.edu.cn.
⁹ Guangdong Provincial Key Laboratory of Protein Function and Regulation in Agricultural Organisms, South China Agricultural University, Guangzhou, 510642, China. lotichen@scau.edu.cn.
¹⁰ Key Laboratory of Plant Functional Genomics and Biotechnology of Guangdong Provincial Higher Education Institutions, South China Agricultural University, Guangzhou, 510642, China. lotichen@scau.edu.cn.
¹¹ College of Life Sciences, South China Agricultural University, Guangzhou, 510642, China. lotichen@scau.edu.cn.

PMID: 27020919
DOI: 10.1007/s11427-016-5046-1

No abstract available

Publication types

Research Support, Non-U.S. Gov't

MeSH terms

Binding, Competitive
Chromatin Immunoprecipitation / methods
Chromatography, Affinity / methods
DNA / genetics
DNA / metabolism*
DNA Footprinting / methods
DNA-Binding Proteins / metabolism*
Protein Binding
Proteins / metabolism*
Reproducibility of Results
Transcription Factors / metabolism*

Substances

DNA-Binding Proteins
Proteins
Transcription Factors
DNA