LncRNA NBR2 engages a metabolic checkpoint by regulating AMPK under energy stress

Nat Cell Biol. 2016 Apr;18(4):431-42. doi: 10.1038/ncb3328. Epub 2016 Mar 21.

Abstract

Long non-coding RNAs (lncRNAs) have emerged as critical regulators in various cellular processes. However, the potential involvement of lncRNAs in kinase signalling remains largely unknown. AMP-activated protein kinase (AMPK) acts as a critical sensor of cellular energy status. Here we show that the lncRNA NBR2 (neighbour of BRCA1 gene 2) is induced by the LKB1-AMPK pathway under energy stress. On energy stress, NBR2 in turn interacts with AMPK and promotes AMPK kinase activity, thus forming a feed-forward loop to potentiate AMPK activation during energy stress. Depletion of NBR2 attenuates energy-stress-induced AMPK activation, resulting in unchecked cell cycling, altered apoptosis/autophagy response, and increased tumour development in vivo. NBR2 is downregulated and its low expression correlates with poor clinical outcomes in some human cancers. Together, the results of our study uncover a mechanism coupling lncRNAs with metabolic stress response, and provides a broad framework to understand further the regulation of kinase signalling by lncRNAs.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • AMP-Activated Protein Kinases / genetics*
  • AMP-Activated Protein Kinases / metabolism
  • Animals
  • Blotting, Western
  • Breast Neoplasms / genetics
  • Breast Neoplasms / metabolism
  • Breast Neoplasms / pathology
  • Cell Line, Tumor
  • Energy Metabolism / genetics*
  • Female
  • Gene Expression Profiling
  • HEK293 Cells
  • HeLa Cells
  • Humans
  • Kaplan-Meier Estimate
  • Mice, Nude
  • Microscopy, Confocal
  • Neoplasm Proteins / genetics*
  • RNA Interference
  • RNA, Long Noncoding / genetics*
  • Reverse Transcriptase Polymerase Chain Reaction
  • Signal Transduction / genetics
  • Stress, Physiological / genetics
  • Transcription Factors / genetics*
  • Transplantation, Heterologous

Substances

  • NBR2 lncRNA, human
  • Neoplasm Proteins
  • RNA, Long Noncoding
  • Transcription Factors
  • AMP-Activated Protein Kinases

Associated data

  • GEO/GSE77415