Recombinant thiopeptides containing noncanonical amino acids

Proc Natl Acad Sci U S A. 2016 Mar 29;113(13):3615-20. doi: 10.1073/pnas.1602733113. Epub 2016 Mar 14.

Abstract

Thiopeptides are a subclass of ribosomally synthesized and posttranslationally modified peptides (RiPPs) with complex molecular architectures and an array of biological activities, including potent antimicrobial activity. Here we report the generation of thiopeptides containing noncanonical amino acids (ncAAs) by introducing orthogonal amber suppressor aminoacyl-tRNA synthetase/tRNA pairs into a thiocillin producer strain of Bacillus cereus .We demonstrate that thiopeptide variants containing ncAAs with bioorthogonal chemical reactivity can be further postbiosynthetically modified with biophysical probes, including fluorophores and photo-cross-linkers. This work allows the site-specific incorporation of ncAAs into thiopeptides to increase their structural diversity and probe their biological activity; similar approaches can likely be applied to other classes of RiPPs.

Keywords: antibiotic; biosynthesis; natural products; noncanonical amino acid; thiopeptides.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Amino Acid Substitution
  • Amino Acids / chemistry*
  • Amino Acids / genetics
  • Amino Acids / metabolism
  • Bacillus cereus / genetics
  • Bacillus cereus / metabolism
  • Molecular Structure
  • Mutagenesis, Site-Directed
  • Peptides / chemistry*
  • Peptides / genetics
  • Peptides / metabolism
  • Protein Engineering
  • Protein Processing, Post-Translational
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Tandem Mass Spectrometry

Substances

  • Amino Acids
  • Peptides
  • Recombinant Proteins
  • thiocillin