High-Quality Draft Genome Sequence of Low-pH-Active Veillonella parvula Strain SHI-1, Isolated from Human Saliva within an In Vitro Oral Biofilm Model

Anna Edlund; Quanhui Liu; Michael Watling; Thao T To; Roger E Bumgarner; Xuesong He; Wenyuan Shi; Jeffrey S McLean

doi:10.1128/genomeA.01684-15

High-Quality Draft Genome Sequence of Low-pH-Active Veillonella parvula Strain SHI-1, Isolated from Human Saliva within an In Vitro Oral Biofilm Model

Genome Announc. 2016 Feb 18;4(1):e01684-15. doi: 10.1128/genomeA.01684-15.

Authors

Anna Edlund¹, Quanhui Liu², Michael Watling³, Thao T To², Roger E Bumgarner³, Xuesong He⁴, Wenyuan Shi⁴, Jeffrey S McLean²

Affiliations

¹ Microbial and Environmental Genomics, J. Craig Venter Institute, La Jolla, California, USA School of Dentistry, University of California, Los Angeles, Los Angeles, California, USA annaedlund@ucla.edu.
² Department of Periodontics, University of Washington, Seattle, Washington, USA.
³ Department of Microbiology, University of Washington, Seattle, Washington, USA.
⁴ School of Dentistry, University of California, Los Angeles, Los Angeles, California, USA.

Abstract

We announce here a draft genome sequence of Veillonella parvula strain SHI-1, obtained from healthy human saliva, discovered to be active at low pH using metatranscriptomics within an in vitro oral biofilm model. The genome is composed of 7 contigs, for a total of 2,200,064 bp.

Abstract

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