Characterization of ribonuclease III from Brucella

Gene. 2016 Apr 1;579(2):183-92. doi: 10.1016/j.gene.2015.12.068. Epub 2016 Jan 8.

Abstract

Bacterial ribonuclease III (RNase III) is a highly conserved endonuclease, which plays pivotal roles in RNA maturation and decay pathways by cleaving double-stranded structure of RNAs. Here we cloned rncS gene from the genomic DNA of Brucella melitensis, and analyzed the cleavage properties of RNase III from Brucella. We identified Brucella-encoding small RNA (sRNA) by high-throughput sequencing and northern blot, and found that sRNA of Brucella and Homo miRNA precursor (pre-miRNA) can be bound and cleaved by B.melitensis ribonuclease III (Bm-RNase III). Cleavage activity of Bm-RNase III is bivalent metal cations- and alkaline buffer-dependent. We constructed several point mutations in Bm-RNase III, whose cleavage activity indicated that the 133th Glutamic acid residue was required for catalytic activity. Western blot revealed that Bm-RNase III was differently expressed in Brucella virulence strain 027 and vaccine strain M5-90. Collectively, our data suggest that Brucella RNase III can efficiently bind and cleave stem-loop structure of small RNA, and might participate in regulation of virulence in Brucella.

Keywords: Brucella; Cleavage; RNase III; sRNA.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence / genetics
  • Brucella / enzymology*
  • Brucella / pathogenicity
  • Cloning, Molecular
  • Escherichia coli / enzymology
  • Nucleic Acid Conformation*
  • RNA Stability / genetics*
  • Ribonuclease III / chemistry
  • Ribonuclease III / genetics*
  • Ribonuclease III / metabolism
  • Signal Transduction / genetics
  • Substrate Specificity

Substances

  • Ribonuclease III